Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_018024 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:5212651-5218110 (+) |
| Description | Similar to XRCC3: DNA repair protein XRCC3 homolog (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_018024 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 40 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g57450 |
Plays essential roles in DNA damage repair in both somatic and meiotic cells. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000722 | telomere maintenance via recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.042; coverage=36.876; evalue=1.2e-87; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000724 | double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006302 | double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.042; coverage=36.876; evalue=1.2e-87; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.803; coverage=36.364; evalue=2.65e-31; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006508 | proteolysis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.108; coverage=53.137; evalue=4.03e-75; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.803; coverage=36.364; evalue=2.65e-31; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010824 | regulation of centrosome duplication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015074 | DNA integration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.108; coverage=53.137; evalue=4.03e-75; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031297 | replication fork processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036297 | interstrand cross-link repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045003 | double-strand break repair via synthesis-dependent strand annealing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.042; coverage=36.876; evalue=1.2e-87; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051321 | meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.042; coverage=36.876; evalue=1.2e-87; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071140 | resolution of mitotic recombination intermediates | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.042; coverage=36.876; evalue=1.2e-87; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090267 | positive regulation of mitotic cell cycle spindle assembly checkpoint | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090656 | t-circle formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.042; coverage=36.876; evalue=1.2e-87; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090657 | telomeric loop disassembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.803; coverage=36.364; evalue=2.65e-31; UniProt GO evidence=TAS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090737 | telomere maintenance via telomere trimming | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.803; coverage=36.364; evalue=2.65e-31; UniProt GO evidence=IC:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005657 | replication fork | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.042; coverage=36.876; evalue=1.2e-87; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.042; coverage=36.876; evalue=1.2e-87; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005759 | mitochondrial matrix | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033065 | Rad51C-XRCC3 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.042; coverage=36.876; evalue=1.2e-87; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043596 | nuclear replication fork | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000400 | four-way junction DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003676 | nucleic acid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.108; coverage=53.137; evalue=4.03e-75; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.875; coverage=35.98; evalue=6.22e-32; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003697 | single-stranded DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.042; coverage=36.876; evalue=1.2e-87; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003964 | RNA-directed DNA polymerase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.108; coverage=53.137; evalue=4.03e-75; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004190 | aspartic-type endopeptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.108; coverage=53.137; evalue=4.03e-75; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004519 | endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.108; coverage=53.137; evalue=4.03e-75; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.042; coverage=36.876; evalue=1.2e-87; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.108; coverage=53.137; evalue=4.03e-75; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008821 | crossover junction DNA endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140664 | ATP-dependent DNA damage sensor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.042; coverage=36.876; evalue=1.2e-87; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G57450 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.042; coverage=36.876; evalue=1.2e-87 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:768244 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.875; coverage=35.98; evalue=6.22e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:7517 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.803; coverage=36.364; evalue=2.65e-31 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:74335 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.714; coverage=35.851; evalue=9.37e-36 | UniProtKB/Swiss-Prot DAT 2026 current_release |