Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_017390 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:148077620-148078594 (-) |
| Description | Similar to IRX15-L: Protein IRX15-LIKE (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_017390 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 11 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g67210 |
Required for xylan biosynthesis, but not directly involved in catalyzing the addition of sugars to the growing polymer. | |
At3g50220 |
Required for xylan biosynthesis, but not directly involved in catalyzing the addition of sugars to the growing polymer. | |
At1g09610 |
Methyltransferase catalyzing 4-O-methylation of glucuronic acid side chains on xylan. | |
At1g33800 |
Methyltransferase catalyzing 4-O-methylation of glucuronic acid side chains on xylan. | |
At4g09990 |
Methyltransferase catalyzing 4-O-methylation of glucuronic acid side chains on xylan. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0005976 | polysaccharide metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.256; coverage=68.827; evalue=4.17e-49; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009808 | lignin metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.256; coverage=68.827; evalue=4.17e-49; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009834 | plant-type secondary cell wall biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.686; coverage=98.148; evalue=9.66e-104; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032259 | methylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.238; coverage=73.765; evalue=7.13e-50; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045491 | xylan metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.238; coverage=73.765; evalue=7.13e-50; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045492 | xylan biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.686; coverage=98.148; evalue=9.66e-104; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.686; coverage=98.148; evalue=9.66e-104; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.238; coverage=73.765; evalue=7.13e-50; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.256; coverage=68.827; evalue=4.17e-49; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.686; coverage=98.148; evalue=9.66e-104; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030775 | glucuronoxylan 4-O-methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.238; coverage=73.765; evalue=7.13e-50; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G09610 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.238; coverage=73.765; evalue=7.13e-50 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G33800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.256; coverage=68.827; evalue=4.17e-49 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G50220 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.269; coverage=103.395; evalue=5.63e-98 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G09990 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=39.91; coverage=68.827; evalue=4.36e-47 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G67210 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.686; coverage=98.148; evalue=9.66e-104 | UniProtKB/Swiss-Prot DAT 2026 current_release |