Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_016682 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:130748414-130749403 (+) |
| Description | Similar to BAM1: Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_016682 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 46 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g65700 |
LRR-rich receptor-like kinase (LRR-RLK) that, similarly to CLV1 and BAM3, participates in the detection of the CLAVATA-family peptides (e.g. CLE25, CLE26 and CLE45), and to the regulation of the triggered signaling required for protophloem differentiation and meristems maintenance through the phosphorylation of CIK proteins (CIKs) and of PBL34, PBL35 and PBL36. | No verified direct reference in this release |
At3g49670 |
LRR-rich receptor-like kinase (LRR-RLK) implicated in the detection of the CLAVATA-family peptides (CLEs), and to the regulation of the triggered signaling required for protophloem differentiation and meristems maintenance through the phosphorylation of CIK proteins (CIKs) and, probably, of PBL34, PBL35 and PBL36. | No verified direct reference in this release |
At5g49660 |
Receptor kinase involved in the perception of C-terminally encoded plant signaling peptide (CEP) and subsequent regulation of root and shoot development. | |
At5g20480 |
Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs); phosphorylates BIK1 upon elicitation to regulate immune responses such as defense hormone expression (e.g. jasmonic acid (JA) and salicylic acid (SA)). | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os06g0130100 |
Receptor kinase involved in salt drought stress responses. |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0002237 | response to molecule of bacterial origin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.579; coverage=93.443; evalue=1.02e-06; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002764 | immune response-regulating signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.579; coverage=93.443; evalue=1.02e-06; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009553 | embryo sac development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=100.82; evalue=2.65e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009626 | plant-type hypersensitive response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.579; coverage=93.443; evalue=1.02e-06; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009755 | hormone-mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009934 | regulation of meristem structural organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010051 | xylem and phloem pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010075 | regulation of meristem growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010103 | stomatal complex morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=100.82; evalue=2.65e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010311 | lateral root formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016045 | detection of bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.579; coverage=93.443; evalue=1.02e-06; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030154 | cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031540 | regulation of anthocyanin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035556 | intracellular signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048229 | gametophyte development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048437 | floral organ development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048481 | plant ovule development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=100.82; evalue=2.65e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048831 | regulation of shoot system development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080113 | regulation of seed growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090548 | response to nitrate starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140426 | pathogen-associated molecular pattern receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.579; coverage=93.443; evalue=1.02e-06; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901002 | positive regulation of response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=100.82; evalue=2.65e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901141 | regulation of lignin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901333 | positive regulation of lateral root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902025 | nitrate import | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902584 | positive regulation of response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=100.82; evalue=2.65e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000023 | regulation of lateral root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000038 | regulation of stomatal complex development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=100.82; evalue=2.65e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000280 | regulation of root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000652 | regulation of secondary cell wall biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.579; coverage=93.443; evalue=1.02e-06; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=100.82; evalue=2.65e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001653 | peptide receptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004674 | protein serine/threonine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004675 | transmembrane receptor protein serine/threonine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=100.82; evalue=2.65e-07; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004714 | transmembrane receptor protein tyrosine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017046 | peptide hormone binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019199 | transmembrane receptor protein kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.579; coverage=93.443; evalue=1.02e-06; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033612 | receptor serine/threonine kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0038023 | signaling receptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042277 | peptide binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051428 | peptide hormone receptor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106310 | protein serine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G49670 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.455; coverage=90.164; evalue=7.04e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G20480 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.579; coverage=93.443; evalue=1.02e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G49660 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.286; coverage=86.066; evalue=8.46e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G65700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.273; coverage=90.164; evalue=3.15e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os06g0130100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=100.82; evalue=2.65e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4340000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=100.82; evalue=2.65e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release |