Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_016494 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:124853304-124854275 (-) |
| Description | Similar to At3g15360: Thioredoxin M4%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_016494 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 20 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g15360 |
Thiol-disulfide oxidoreductase involved in the redox regulation of enzyme of the oxidative pentose phosphate pathway. | No verified direct reference in this release |
At1g03680 |
Thiol-disulfide oxidoreductase involved in the redox regulation of enzymes of both reductive pentose phosphate pathway (Calvin-Benson cycle) and oxidative pentose phosphate pathway. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os02g0639900 |
Probable thiol-disulfide oxidoreductase that may be involved in the redox regulation of chloroplastic enzymes. | No verified direct reference in this release |
Os04g0530600 |
Probable thiol-disulfide oxidoreductase that may be involved in the redox regulation of chloroplastic enzymes. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006109 | regulation of carbohydrate metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.469; coverage=88.043; evalue=1.02e-56; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043085 | positive regulation of catalytic activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.469; coverage=88.043; evalue=1.02e-56; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043086 | negative regulation of catalytic activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.469; coverage=88.043; evalue=1.02e-56; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009535 | chloroplast thylakoid membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009579 | thylakoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010319 | stromule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.469; coverage=88.043; evalue=1.02e-56; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048046 | apoplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.469; coverage=88.043; evalue=1.02e-56; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004857 | enzyme inhibitor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008047 | enzyme activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015035 | protein-disulfide reductase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019904 | protein domain specific binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62; UniProt GO evidence=IPI:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901149 | salicylic acid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.469; coverage=88.043; evalue=1.02e-56; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G03680 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.469; coverage=88.043; evalue=1.02e-56 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G15360 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.88; coverage=103.804; evalue=1.68e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os02g0639900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.184; coverage=79.891; evalue=2.7e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0530600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.143; coverage=79.891; evalue=6.82e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release |