Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_016329`
Query reference	OH1004
Location	Chr03:119006765-119008590 (-)
Description	Similar to PBL23: Probable serine/threonine-protein kinase PBL23 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_016329 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 24 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At3g20530`	May be involved in plant defense signaling.	No verified direct reference in this release
`At5g18610`	May act as a receptor-like cytoplasmic kinase in chitin-induced immune signaling.	Selective regulation of the chitin-induced defense response by the Arabidopsis receptor-like cytoplasmic kinase PBL27.2014 · DOI: 10.1111/tpj.12535 The Arabidopsis CERK1-associated kinase PBL27 connects chitin perception to MAPK activation.2016 · DOI: 10.15252/embj.201694248
`At5g02800`	Serine/threonine-protein kinase involved in the positive regulation of brassinosteroid (BR) signaling and plant growth.	No verified direct reference in this release
`At5g13160`	Protein kinase required for plant defense mechanism mediated by the disease resistance (R) protein RPS5.	The Arabidopsis PBS1 resistance gene encodes a member of a novel protein kinase subfamily.2001 · DOI: 10.1046/j.1365-313x.2001.01014.x Cleavage of Arabidopsis PBS1 by a bacterial type III effector.2003 · DOI: 10.1126/science.1085671 Indirect activation of a plant nucleotide binding site-leucine-rich repeat protein by a bacterial protease.2007 · DOI: 10.1073/pnas.0608779104 Receptor-like cytoplasmic kinases integrate signaling from multiple plant immune receptors and are targeted by a Pseudomonas syringae effector.2010 · DOI: 10.1016/j.chom.2010.03.007 Activation of a plant nucleotide binding-leucine rich repeat disease resistance protein by a modified self protein.2012 · DOI: 10.1111/j.1462-5822.2012.01779.x

Rice

Reference gene ID	Possible function	Papers / DOI
`Os05g0372100`	Functions as an immediate downstream signaling partner of CERK1 in the microbial peptidoglycans (PGNs) and fungal chitin signaling pathways that mediate innate immunity.	A receptor-like cytoplasmic kinase targeted by a plant pathogen effector is directly phosphorylated by the chitin receptor and mediates rice immunity.2013 · DOI: 10.1016/j.chom.2013.02.007

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0002221	pattern recognition receptor signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=63.725; coverage=82.038; evalue=2.05e-146; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0002758	innate immune response-activating signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=65.938; coverage=85.791; evalue=3.09e-151; UniProt GO evidence=EXP:PHI-base	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006468	protein phosphorylation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.705; coverage=83.646; evalue=2.8e-151; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006952	defense response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.753; coverage=97.855; evalue=5.07e-177; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009742	brassinosteroid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.705; coverage=83.646; evalue=2.8e-151; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042742	defense response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=63.725; coverage=82.038; evalue=2.05e-146; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043410	positive regulation of MAPK cascade	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=66.238; coverage=83.378; evalue=3.21e-151; UniProt GO evidence=IMP:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045087	innate immune response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=65.938; coverage=85.791; evalue=3.09e-151; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045088	regulation of innate immune response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=66.238; coverage=83.378; evalue=3.21e-151; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046777	protein autophosphorylation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=63.725; coverage=82.038; evalue=2.05e-146; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050832	defense response to fungus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=66.238; coverage=83.378; evalue=3.21e-151; UniProt GO evidence=IDA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071323	cellular response to chitin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=66.238; coverage=83.378; evalue=3.21e-151; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900150	regulation of defense response to fungus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=66.238; coverage=83.378; evalue=3.21e-151; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900426	positive regulation of defense response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=66.238; coverage=83.378; evalue=3.21e-151; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900459	positive regulation of brassinosteroid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.705; coverage=83.646; evalue=2.8e-151; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=63.725; coverage=82.038; evalue=2.05e-146; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.705; coverage=83.646; evalue=2.8e-151; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.753; coverage=97.855; evalue=5.07e-177; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005777	peroxisome	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.753; coverage=97.855; evalue=5.07e-177; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.753; coverage=97.855; evalue=5.07e-177; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004672	protein kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.753; coverage=97.855; evalue=5.07e-177; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004674	protein serine/threonine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.753; coverage=97.855; evalue=5.07e-177; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005524	ATP binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.753; coverage=97.855; evalue=5.07e-177; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0106310	protein serine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.753; coverage=97.855; evalue=5.07e-177; UniProt GO evidence=IEA:RHEA	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G20530	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.753; coverage=97.855; evalue=5.07e-177	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G02800	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.705; coverage=83.646; evalue=2.8e-151	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G13160	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=63.725; coverage=82.038; evalue=2.05e-146	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G18610	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=66.238; coverage=83.378; evalue=3.21e-151	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os05g0372100	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=65.938; coverage=85.791; evalue=3.09e-151	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4338592	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=65.938; coverage=85.791; evalue=3.09e-151	UniProtKB/Swiss-Prot DAT 2026 current_release