Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_016117`
Query reference	OH1004
Location	Chr03:111023111-111025118 (-)
Description	Similar to AAP2: Amino acid permease 2 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_016117 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 16 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g09220`	Amino acid-proton symporter.	Substrate specificity and expression profile of amino acid transporters (AAPs) in Arabidopsis.1995 · DOI: 10.1074/jbc.270.27.16315 Differential expression of two related amino acid transporters with differing substrate specificity in Arabidopsis thaliana.1993 · DOI: 10.1046/j.1365-313x.1993.04060993.x
`At5g63850`	Amino acid-proton symporter.	Substrate specificity and expression profile of amino acid transporters (AAPs) in Arabidopsis.1995 · DOI: 10.1074/jbc.270.27.16315
`At5g23810`	Amino acid-proton symporter.	No verified direct reference in this release
`At1g77380`	Amino acid-proton symporter.	Substrate specificity and expression profile of amino acid transporters (AAPs) in Arabidopsis.1995 · DOI: 10.1074/jbc.270.27.16315
`At1g10010`	Amino acid-proton symporter.	The amino acid permease AAP8 is important for early seed development in Arabidopsis thaliana.2007 · DOI: 10.1007/s00425-007-0527-x

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0003333	amino acid transmembrane transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.25; coverage=92.562; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006865	amino acid transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.25; coverage=92.562; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006952	defense response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.315; coverage=95.248; evalue=0.0; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015800	acidic amino acid transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.25; coverage=92.562; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015802	basic amino acid transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.315; coverage=95.248; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015804	neutral amino acid transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.25; coverage=92.562; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0110126	phloem loading	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.25; coverage=92.562; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.25; coverage=92.562; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016020	membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.25; coverage=92.562; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031965	nuclear membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.315; coverage=95.248; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015171	amino acid transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.25; coverage=92.562; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015172	acidic amino acid transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.134; coverage=92.562; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015174	basic amino acid transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.315; coverage=95.248; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015175	neutral L-amino acid transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.134; coverage=92.562; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015293	symporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.25; coverage=92.562; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015399	primary active transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.134; coverage=92.562; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G10010	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=52.967; coverage=94.008; evalue=2.77e-177	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G77380	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.315; coverage=95.248; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G09220	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.25; coverage=92.562; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G23810	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.919; coverage=91.322; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G63850	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.134; coverage=92.562; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release