Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_015997 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:102441535-102446133 (+) |
| Description | Similar to UBC23: Probable ubiquitin-conjugating enzyme E2 23 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_015997 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 13 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g16920 |
Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. | No verified direct reference in this release |
At2g33770 |
E2 ubiquitin-protein ligase that mediates E1-dependent protein ubiquitination. |
PHO2-dependent degradation of PHO1 modulates phosphate homeostasis in Arabidopsis.2012 · DOI: 10.1105/tpc.112.096636 Nitrogen limitation adaptation, a target of microRNA827, mediates degradation of plasma membrane-localized phosphate transporters to maintain phosphate homeostasis in Arabidopsis.2013 · DOI: 10.1105/tpc.113.116012
|
At3g15355 |
Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. | No verified direct reference in this release |
At1g53025 |
Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. | No verified direct reference in this release |
At1g53020 |
Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006817 | phosphate ion transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.083; coverage=86.497; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016036 | cellular response to phosphate starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.083; coverage=86.497; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.279; coverage=102.077; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055062 | phosphate ion homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.083; coverage=86.497; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000185 | regulation of phosphate transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.083; coverage=86.497; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.083; coverage=86.497; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.279; coverage=102.077; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.083; coverage=86.497; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.083; coverage=86.497; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.083; coverage=86.497; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.279; coverage=102.077; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016874 | ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.083; coverage=86.497; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061631 | ubiquitin conjugating enzyme activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.279; coverage=102.077; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G53025 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.522; coverage=21.719; evalue=3.35e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G16920 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.279; coverage=102.077; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G33770 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.083; coverage=86.497; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G15355 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.49; coverage=24.646; evalue=3.37e-84 | UniProtKB/Swiss-Prot DAT 2026 current_release |