Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_015784 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:84421769-84425746 (-) |
| Description | Similar to Rbm39: RNA-binding protein 39 (Mus musculus OX%3D10090) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_015784 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 34 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000245 | spliceosomal complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000398 | mRNA splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006396 | RNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.353; coverage=68.912; evalue=1.64e-75; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008380 | RNA splicing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031397 | negative regulation of protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033120 | positive regulation of RNA splicing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045292 | mRNA cis splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.085; coverage=68.912; evalue=1.11e-52; UniProt GO evidence=EXP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.569; coverage=62.522; evalue=1.46e-52; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048024 | regulation of mRNA splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048025 | negative regulation of mRNA splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000243 | commitment complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000974 | Prp19 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.085; coverage=68.912; evalue=1.11e-52; UniProt GO evidence=HDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005681 | spliceosomal complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.085; coverage=68.912; evalue=1.11e-52; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015630 | microtubule cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.569; coverage=62.522; evalue=1.46e-52; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034451 | centriolar satellite | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071004 | U2-type prespliceosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0089701 | U2AF complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003713 | transcription coactivator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008187 | poly-pyrimidine tract binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019899 | enzyme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030628 | pre-mRNA 3'-splice site binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050733 | RS domain binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75; UniProt GO evidence=IPI:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070742 | C2H2 zinc finger domain binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140678 | molecular function inhibitor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990446 | U1 snRNP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | hsa:55147 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.569; coverage=62.522; evalue=1.46e-52 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:9584 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.353; coverage=68.912; evalue=1.64e-75 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:170791 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.353; coverage=68.912; evalue=1.52e-75 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:22185 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.289; coverage=66.839; evalue=1.49e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2542545 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.085; coverage=68.912; evalue=1.11e-52 | UniProtKB/Swiss-Prot DAT 2026 current_release |