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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_014208
Query referenceOH1004
LocationChr03:43653016-43660111 (-)
DescriptionSimilar to WRI1: Ethylene-responsive transcription factor WRI1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_014208 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 28 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g54320 May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).
Contrapuntal networks of gene expression during Arabidopsis seed filling.2002 · DOI: 10.1105/tpc.000877
WRINKLED1 encodes an AP2/EREB domain protein involved in the control of storage compound biosynthesis in Arabidopsis.2004 · DOI: 10.1111/j.1365-313x.2004.02235.x
ACTIVATOR of Spomin::LUC1/WRINKLED1 of Arabidopsis thaliana transactivates sugar-inducible promoters.2005 · DOI: 10.1093/pcp/pci072
A spatiotemporal analysis of enzymatic activities associated with carbon metabolism in wild-type and mutant embryos of Arabidopsis using in situ histochemistry.2006 · DOI: 10.1111/j.1365-313x.2006.02682.x
WRI1 is required for seed germination and seedling establishment.2006 · DOI: 10.1104/pp.106.079574
wrinkled1: A novel, low-seed-oil mutant of Arabidopsis with a deficiency in the seed-specific regulation of carbohydrate metabolism.1998 · DOI: 10.1104/pp.118.1.91
At1g16060 Probably acts as a transcriptional activator. No verified direct reference in this release
At1g51190 Probably acts as a transcriptional activator. No verified direct reference in this release
At5g10510 Probably acts as a transcriptional activator. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000723telomere maintenanceBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.525; coverage=40.657; evalue=1.66e-56; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006109regulation of carbohydrate metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.781; coverage=34.702; evalue=2.76e-79; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006110regulation of glycolytic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.781; coverage=34.702; evalue=2.76e-79; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.781; coverage=34.702; evalue=2.76e-79; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.638; coverage=28.337; evalue=3.71e-60; UniProt GO evidence=TAS:TIGRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006629lipid metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.781; coverage=34.702; evalue=2.76e-79; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007389pattern specification processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.525; coverage=40.657; evalue=1.66e-56; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008610lipid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.781; coverage=34.702; evalue=2.76e-79; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009414response to water deprivationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.638; coverage=28.337; evalue=3.71e-60; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009651response to salt stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.638; coverage=28.337; evalue=3.71e-60; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009734auxin-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.525; coverage=40.657; evalue=1.66e-56; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009737response to abscisic acidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.638; coverage=28.337; evalue=3.71e-60; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009744response to sucroseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.781; coverage=34.702; evalue=2.76e-79; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009873ethylene-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.781; coverage=34.702; evalue=2.76e-79; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010073meristem maintenanceBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.525; coverage=40.657; evalue=1.66e-56; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010187negative regulation of seed germinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.638; coverage=28.337; evalue=3.71e-60; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010449root meristem growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.525; coverage=40.657; evalue=1.66e-56; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019432triglyceride biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.781; coverage=34.702; evalue=2.76e-79; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019827stem cell population maintenanceBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.525; coverage=40.657; evalue=1.66e-56; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0040008regulation of growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.638; coverage=28.337; evalue=3.71e-60; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045723positive regulation of fatty acid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.638; coverage=28.337; evalue=3.71e-60; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048364root developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.525; coverage=40.657; evalue=1.66e-56; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901959positive regulation of cutin biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.781; coverage=34.702; evalue=2.76e-79; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.781; coverage=34.702; evalue=2.76e-79; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000981DNA-binding transcription factor activity, RNA polymerase II-specificMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.638; coverage=28.337; evalue=3.71e-60; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.781; coverage=34.702; evalue=2.76e-79; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.781; coverage=34.702; evalue=2.76e-79; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019900kinase bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.781; coverage=34.702; evalue=2.76e-79; UniProt GO evidence=IPI:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G16060KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.638; coverage=28.337; evalue=3.71e-60UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G51190KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.525; coverage=40.657; evalue=1.66e-56UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G54320KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.781; coverage=34.702; evalue=2.76e-79UniProtKB/Swiss-Prot DAT 2026 current_release