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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_014202
Query referenceOH1004
LocationChr03:43598616-43604462 (+)
DescriptionSimilar to HST1: Protein HASTY 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_014202 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 25 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g05040 Nucleocytoplasmic transporter involved in the nuclear export of microRNAs (miRNAs).
HASTY, the Arabidopsis ortholog of exportin 5/MSN5, regulates phase change and morphogenesis.2003 · DOI: 10.1242/dev.00362
Nuclear processing and export of microRNAs in Arabidopsis.2005 · DOI: 10.1073/pnas.0405570102
Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3.2006 · DOI: 10.1242/dev.02521

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006405RNA export from nucleusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.976; coverage=101.451; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006611protein export from nucleusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.976; coverage=101.451; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009910negative regulation of flower developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.976; coverage=101.451; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009944polarity specification of adaxial/abaxial axisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.976; coverage=101.451; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009965leaf morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.976; coverage=101.451; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010586miRNA metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.716; coverage=48.72; evalue=3.79e-20; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031047regulatory ncRNA-mediated gene silencingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.976; coverage=101.451; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035281pre-miRNA export from nucleusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.716; coverage=48.72; evalue=3.79e-20; UniProt GO evidence=IDA:BHF-UCLUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048364root developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.976; coverage=101.451; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048367shoot system developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.976; coverage=101.451; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0061716miRNA export from nucleusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.976; coverage=101.451; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.976; coverage=101.451; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005635nuclear envelopeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.669; coverage=99.744; evalue=4.28e-47; UniProt GO evidence=ISS:dictyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.716; coverage=48.72; evalue=3.79e-20; UniProt GO evidence=IDA:HPAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.976; coverage=101.451; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.669; coverage=99.744; evalue=4.28e-47; UniProt GO evidence=ISS:dictyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016442RISC complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.716; coverage=48.72; evalue=3.79e-20; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042565RNA nuclear export complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.716; coverage=48.72; evalue=3.79e-20; UniProt GO evidence=IDA:BHF-UCLUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000049tRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.669; coverage=99.744; evalue=4.28e-47; UniProt GO evidence=ISS:dictyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.976; coverage=101.451; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003729mRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.716; coverage=48.72; evalue=3.79e-20; UniProt GO evidence=IDA:BHF-UCLUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005049nuclear export signal receptor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.976; coverage=101.451; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031267small GTPase bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.669; coverage=99.744; evalue=4.28e-47; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070883pre-miRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.716; coverage=48.72; evalue=3.79e-20; UniProt GO evidence=IDA:BHF-UCLUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1905172RISC complex bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.716; coverage=48.72; evalue=3.79e-20; UniProt GO evidence=IDA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G05040KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.976; coverage=101.451; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGddi:DDB_G0284379KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.669; coverage=99.744; evalue=4.28e-47UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:57510KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.716; coverage=48.72; evalue=3.79e-20UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:72322KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=20.713; coverage=62.201; evalue=2.54e-17UniProtKB/Swiss-Prot DAT 2026 current_release