Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_014188 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:43336801-43340322 (+) |
| Description | Similar to GABA-TP1: Gamma aminobutyrate transaminase 1%2C mitochondrial (Solanum lycopersicum OX%3D4081) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_014188 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 32 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g22200 |
Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate or glyoxylate as amino-group acceptor, but not 2- oxoglutarate. |
Pollen tube growth and guidance is regulated by POP2, an Arabidopsis gene that controls GABA levels.2003 · DOI: 10.1016/s0092-8674(03)00479-3 The Arabidopsis her1 mutant implicates GABA in E-2-hexenal responsiveness.2008 · DOI: 10.1111/j.1365-313x.2007.03323.x
|
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
UniProt: B8BBZ7 |
Transaminase that degrades gamma-amino butyric acid (GABA). | No verified direct reference in this release |
Os04g0614600 |
Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate as amino-group acceptor, but not 2-oxoglutarate. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0005985 | sucrose metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006020 | inositol metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006105 | succinate metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006536 | glutamate metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006540 | gamma-aminobutyrate shunt | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006541 | glutamine metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009102 | biotin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.973; coverage=94.79; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009448 | gamma-aminobutyric acid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.973; coverage=94.79; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009450 | gamma-aminobutyric acid catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009821 | alkaloid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.973; coverage=94.79; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009860 | pollen tube growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009865 | pollen tube adhesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009943 | adaxial/abaxial axis specification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010154 | fruit development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010183 | pollen tube guidance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019484 | beta-alanine catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048366 | leaf development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048367 | shoot system development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097305 | response to alcohol | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.973; coverage=94.79; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=76.846; coverage=100.401; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004015 | adenosylmethionine-8-amino-7-oxononanoate transaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.973; coverage=94.79; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030170 | pyridoxal phosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.973; coverage=94.79; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034387 | 4-aminobutyrate:pyruvate transaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.973; coverage=94.79; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050897 | cobalt ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G22200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.137; coverage=100.802; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0614600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=80.392; coverage=91.984; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sly:543873 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.973; coverage=94.79; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |