Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_013962`
Query reference	OH1004
Location	Chr03:39290959-39295664 (+)
Description	Similar to GAD1: Glutamate decarboxylase 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_013962 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 10 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g17330`	Catalyzes the conversion of glutamate to 4-aminobutanoate (GABA).	Two isoforms of glutamate decarboxylase in Arabidopsis are regulated by calcium/calmodulin and differ in organ distribution.1998 · DOI: 10.1023/a:1006047623263
`At2g02010`	Catalyzes the production of GABA.	No verified direct reference in this release
`At1g65960`	Catalyzes the conversion of glutamate to 4-aminobutanoate (GABA).	Two isoforms of glutamate decarboxylase in Arabidopsis are regulated by calcium/calmodulin and differ in organ distribution.1998 · DOI: 10.1023/a:1006047623263 Characterization of two glutamate decarboxylase cDNA clones from Arabidopsis.1998 · DOI: 10.1104/pp.117.4.1411
`At2g02000`	Catalyzes the production of GABA.	No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006536	glutamate metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=82.02; coverage=100.406; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006538	L-glutamate catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.861; coverage=101.826; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=82.02; coverage=100.406; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=83.573; coverage=98.783; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.861; coverage=101.826; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=83.573; coverage=98.783; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004351	glutamate decarboxylase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.861; coverage=101.826; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005516	calmodulin binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.861; coverage=101.826; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030170	pyridoxal phosphate binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.861; coverage=101.826; evalue=0.0; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0060090	molecular adaptor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.861; coverage=101.826; evalue=0.0; UniProt GO evidence=EXP:DisProt	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G65960	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=82.02; coverage=100.406; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G02000	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=79.675; coverage=99.797; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G02010	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=83.573; coverage=98.783; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G17330	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.861; coverage=101.826; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release