Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_012145`
Query reference	OH1004
Location	Chr03:7316721-7318635 (-)
Description	Similar to WRKY55: WRKY transcription factor 55 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_012145 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 46 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

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Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At2g40740`	Transcription factor.	No verified direct reference in this release
`At4g23810`	Transcription factor.	The antagonist function of Arabidopsis WRKY53 and ESR/ESP in leaf senescence is modulated by the jasmonic and salicylic acid equilibrium.2007 · DOI: 10.1105/tpc.106.042705 A HECT E3 ubiquitin ligase negatively regulates Arabidopsis leaf senescence through degradation of the transcription factor WRKY53.2010 · DOI: 10.1111/j.1365-313x.2010.04233.x Arabidopsis WRKY46 coordinates with WRKY70 and WRKY53 in basal resistance against pathogen Pseudomonas syringae.2012 · DOI: 10.1016/j.plantsci.2011.12.003
`At3g56400`	Transcription factor involved in senescence, biotic and abiotic stress responses by modulating various phytohormones signaling pathways.	WRKY70 modulates the selection of signaling pathways in plant defense.2006 · DOI: 10.1111/j.1365-313x.2006.02712.x The WRKY70 transcription factor of Arabidopsis influences both the plant senescence and defense signaling pathways.2007 · DOI: 10.1007/s00425-006-0474-y Arabidopsis WRKY70 is required for full RPP4-mediated disease resistance and basal defense against Hyaloperonospora parasitica.2007 · DOI: 10.1094/mpmi-20-2-0120 Transcription factor WRKY70 displays important but no indispensable roles in jasmonate and salicylic acid signaling.2008 · DOI: 10.1111/j.1744-7909.2008.00653.x WRKY54 and WRKY70 co-operate as negative regulators of leaf senescence in Arabidopsis thaliana.2012 · DOI: 10.1093/jxb/err450 EDS1 contributes to nonhost resistance of Arabidopsis thaliana against Erwinia amylovora.2012 · DOI: 10.1094/mpmi-05-11-0111 Arabidopsis WRKY46 coordinates with WRKY70 and WRKY53 in basal resistance against pathogen Pseudomonas syringae.2012 · DOI: 10.1016/j.plantsci.2011.12.003 Defense-related transcription factors WRKY70 and WRKY54 modulate osmotic stress tolerance by regulating stomatal aperture in Arabidopsis.2013 · DOI: 10.1111/nph.12378 Identification of a novel type of WRKY transcription factor binding site in elicitor-responsive cis-sequences from Arabidopsis thaliana.2014 · DOI: 10.1007/s11103-013-0136-y Density-dependent interference of aphids with caterpillar-induced defenses in Arabidopsis: involvement of phytohormones and transcription factors.2015 · DOI: 10.1093/pcp/pcu150 Transcription factors WRKY70 and WRKY11 served as regulators in rhizobacterium Bacillus cereus AR156-induced systemic resistance to Pseudomonas syringae pv. tomato DC3000 in Arabidopsis.2016 · DOI: 10.1093/jxb/erv445 Arabidopsis WRKY46, WRKY54, and WRKY70 Transcription Factors Are Involved in Brassinosteroid-Regulated Plant Growth and Drought Responses.2017 · DOI: 10.1105/tpc.17.00364 WRKY70 and its homolog WRKY54 negatively modulate the cell wall-associated defenses to necrotrophic pathogens in Arabidopsis.2017 · DOI: 10.1371/journal.pone.0183731
`At4g11070`	Transcription factor.	No verified direct reference in this release

Rice

Reference gene ID	Possible function	Papers / DOI
`Os05g0571200`	May play a role in defense responses.	The bHLH Rac Immunity1 (RAI1) Is Activated by OsRac1 via OsMAPK3 and OsMAPK6 in Rice Immunity.2012 · DOI: 10.1093/pcp/pcs033

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0000302	response to reactive oxygen species	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0002229	defense response to oomycetes	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006351	DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.209; coverage=90.052; evalue=8.42e-61; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006355	regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.209; coverage=90.052; evalue=8.42e-61; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006952	defense response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.2; coverage=32.723; evalue=6.68e-23; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006970	response to osmotic stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009409	response to cold	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.349; coverage=43.455; evalue=1.16e-21; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009617	response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.554; coverage=43.455; evalue=1.14e-23; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009625	response to insect	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009682	induced systemic resistance	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009742	brassinosteroid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009751	response to salicylic acid	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.554; coverage=43.455; evalue=1.14e-23; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009753	response to jasmonic acid	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009759	indole glucosinolate biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009873	ethylene-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010104	regulation of ethylene-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010120	camalexin biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010150	leaf senescence	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.554; coverage=43.455; evalue=1.14e-23; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010193	response to ozone	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.554; coverage=43.455; evalue=1.14e-23; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010468	regulation of gene expression	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.209; coverage=90.052; evalue=8.42e-61; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031347	regulation of defense response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.554; coverage=43.455; evalue=1.14e-23; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042542	response to hydrogen peroxide	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.554; coverage=43.455; evalue=1.14e-23; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042742	defense response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.554; coverage=43.455; evalue=1.14e-23; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045892	negative regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045893	positive regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.554; coverage=43.455; evalue=1.14e-23; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0047484	regulation of response to osmotic stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050832	defense response to fungus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071456	cellular response to hypoxia	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=HEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080151	positive regulation of salicylic acid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080187	floral organ senescence	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090333	regulation of stomatal closure	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900056	negative regulation of leaf senescence	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900457	regulation of brassinosteroid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000022	regulation of jasmonic acid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.554; coverage=43.455; evalue=1.14e-23; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000031	regulation of salicylic acid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000070	regulation of response to water deprivation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.209; coverage=90.052; evalue=8.42e-61; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.209; coverage=90.052; evalue=8.42e-61; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.554; coverage=43.455; evalue=1.14e-23; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000976	transcription cis-regulatory region binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.209; coverage=90.052; evalue=8.42e-61; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.554; coverage=43.455; evalue=1.14e-23; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.554; coverage=43.455; evalue=1.14e-23; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.209; coverage=90.052; evalue=8.42e-61; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043565	sequence-specific DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.209; coverage=90.052; evalue=8.42e-61; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G40740	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=37.209; coverage=90.052; evalue=8.42e-61	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G56400	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=25.393; evalue=1.01e-21	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G11070	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.349; coverage=43.455; evalue=1.16e-21	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G23810	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.554; coverage=43.455; evalue=1.14e-23	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os05g0571200	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.2; coverage=32.723; evalue=6.68e-23	UniProtKB/Swiss-Prot DAT 2026 current_release