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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_012049
Query referenceOH1004
LocationChr03:5570128-5570808 (+)
DescriptionSimilar to PEX11-4: Peroxisomal membrane protein 11-4 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_012049 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 7 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g47430 Involved in peroxisomal proliferation.
Five Arabidopsis peroxin 11 homologs individually promote peroxisome elongation, duplication or aggregation.2006 · DOI: 10.1242/jcs.02904
The PEROXIN11 protein family controls peroxisome proliferation in Arabidopsis.2007 · DOI: 10.1105/tpc.106.045831

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0534600 Involved in peroxisomal proliferation. No verified direct reference in this release
UniProt: Q01IH3 Involved in peroxisomal proliferation. No verified direct reference in this release
Os03g0302000 Involved in peroxisomal proliferation. No verified direct reference in this release
UniProt: A2XFQ8 Involved in peroxisomal proliferation. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0007031peroxisome organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.304; coverage=99.115; evalue=3.9e-106; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016559peroxisome fissionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.0; coverage=99.558; evalue=1.62e-111; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0044375regulation of peroxisome sizeBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.0; coverage=99.558; evalue=1.62e-111; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005777peroxisomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.304; coverage=99.115; evalue=3.9e-106; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005778peroxisomal membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.0; coverage=99.558; evalue=1.62e-111; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.304; coverage=99.115; evalue=3.9e-106; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042802identical protein bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.0; coverage=99.558; evalue=1.62e-111; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G47430KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.304; coverage=99.115; evalue=3.9e-106UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0302000KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.488; coverage=95.133; evalue=5.46e-31UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os04g0534600KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.0; coverage=99.558; evalue=1.62e-111UniProtKB/Swiss-Prot DAT 2026 current_release