Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_012011 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:4785111-4787728 (-) |
| Description | Similar to NIK2: Protein NSP-INTERACTING KINASE 2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_012011 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 21 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g20140 |
Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. |
GASSHO1 and GASSHO2 encoding a putative leucine-rich repeat transmembrane-type receptor kinase are essential for the normal development of the epidermal surface in Arabidopsis embryos.2008 · DOI: 10.1111/j.1365-313x.2007.03395.x
|
At5g44700 |
Together with GSO1, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. |
GASSHO1 and GASSHO2 encoding a putative leucine-rich repeat transmembrane-type receptor kinase are essential for the normal development of the epidermal surface in Arabidopsis embryos.2008 · DOI: 10.1111/j.1365-313x.2007.03395.x
|
At3g25560 |
Receptor kinase acting, redundantly with other CIKs (e.g. CIK1, CIK2, CIK3, CIK5 and CIK6), as a coreceptor of CLV1, CLV2/CRN and RPK2, and required for CLAVATA-family peptides (e.g. CLV3, CLE25, CLE26 and CLE45) signaling through phosphorylation; this signaling regulates protophloem differentiation and the maintenance of shoot apical meristem (SAM) and root apical meristem (RAM) homeostasis, and acts down-stream of BRX and OPS. | No verified direct reference in this release |
At5g16000 |
May act as a receptor kinase regulating meristem homeostasis and protophloem differentiation. |
Regulated nuclear trafficking of rpL10A mediated by NIK1 represents a defense strategy of plant cells against virus.2008 · DOI: 10.1371/journal.ppat.1000247
|
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os02g0283800 |
May be involved in the regulation of plant growth through the brassinosteroid (BR) signaling pathway. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.111; coverage=92.603; evalue=1.21e-68; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007165 | signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.111; coverage=92.603; evalue=1.21e-68; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009611 | response to wounding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.064; coverage=88.478; evalue=3.26e-66; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009742 | brassinosteroid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.043; coverage=92.319; evalue=3.07e-66; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035556 | intracellular signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.111; coverage=92.603; evalue=1.21e-68; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042659 | regulation of cell fate specification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.064; coverage=88.478; evalue=3.26e-66; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045184 | establishment of protein localization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.064; coverage=88.478; evalue=3.26e-66; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048638 | regulation of developmental growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.111; coverage=92.603; evalue=1.21e-68; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051302 | regulation of cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.064; coverage=88.478; evalue=3.26e-66; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055075 | potassium ion homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.064; coverage=88.478; evalue=3.26e-66; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090708 | specification of plant organ axis polarity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.064; coverage=88.478; evalue=3.26e-66; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0160073 | Casparian strip assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.064; coverage=88.478; evalue=3.26e-66; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901653 | cellular response to peptide | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.111; coverage=92.603; evalue=1.21e-68; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000067 | regulation of root morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.064; coverage=88.478; evalue=3.26e-66; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000280 | regulation of root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.064; coverage=88.478; evalue=3.26e-66; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.111; coverage=92.603; evalue=1.21e-68; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048226 | Casparian strip | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.064; coverage=88.478; evalue=3.26e-66; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004674 | protein serine/threonine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.064; coverage=88.478; evalue=3.26e-66; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004675 | transmembrane receptor protein serine/threonine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.111; coverage=92.603; evalue=1.21e-68; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.111; coverage=92.603; evalue=1.21e-68; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106310 | protein serine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.111; coverage=92.603; evalue=1.21e-68; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G25560 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.111; coverage=92.603; evalue=1.21e-68 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G20140 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.064; coverage=88.478; evalue=3.26e-66 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os02g0283800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.043; coverage=92.319; evalue=3.07e-66 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4329032 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.043; coverage=92.319; evalue=3.07e-66 | UniProtKB/Swiss-Prot DAT 2026 current_release |