Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_012001`
Query reference	OH1004
Location	Chr03:4587086-4589144 (+)
Description	Similar to RAR1: Cysteine and histidine-rich domain-containing protein RAR1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_012001 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 13 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g51700`	Required specifically for plant innate immunity.	Regulatory role of SGT1 in early R gene-mediated plant defenses.2002 · DOI: 10.1126/science.1067747 Arabidopsis RAR1 exerts rate-limiting control of R gene-mediated defenses against multiple pathogens.2002 · DOI: 10.1105/tpc.001040 RAR1 and NDR1 contribute quantitatively to disease resistance in Arabidopsis, and their relative contributions are dependent on the R gene assayed.2002 · DOI: 10.1105/tpc.001032 Cytosolic HSP90 associates with and modulates the Arabidopsis RPM1 disease resistance protein.2003 · DOI: 10.1093/emboj/cdg547 Antagonistic control of disease resistance protein stability in the plant immune system.2005 · DOI: 10.1126/science.1109977 Enhanced defense responses in Arabidopsis induced by the cell wall protein fractions from Pythium oligandrum require SGT1, RAR1, NPR1 and JAR1.2009 · DOI: 10.1093/pcp/pcp044 Specific Arabidopsis HSP90.2 alleles recapitulate RAR1 cochaperone function in plant NB-LRR disease resistance protein regulation.2009 · DOI: 10.1073/pnas.0904877106

Rice

Reference gene ID	Possible function	Papers / DOI
`Os02g0535400`	Involved in basal disease resistance to virulent strain of bacterial blight (X.oryzae) and compatible race of rice blast fungus (M.grisea).	RAR1 and HSP90 form a complex with Rac/Rop GTPase and function in innate-immune responses in rice.2007 · DOI: 10.1105/tpc.107.055517 OsRAR1 and OsSGT1 physically interact and function in rice basal disease resistance.2008 · DOI: 10.1094/mpmi-21-3-0294

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0002679	respiratory burst involved in defense response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.046; coverage=98.636; evalue=1.54e-107; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006952	defense response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.046; coverage=98.636; evalue=1.54e-107; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009626	plant-type hypersensitive response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.046; coverage=98.636; evalue=1.54e-107; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010824	regulation of centrosome duplication	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.769; coverage=106.364; evalue=9.79e-29; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042742	defense response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.046; coverage=98.636; evalue=1.54e-107; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050821	protein stabilization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.046; coverage=98.636; evalue=1.54e-107; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050832	defense response to fungus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.046; coverage=98.636; evalue=1.54e-107; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.046; coverage=98.636; evalue=1.54e-107; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.046; coverage=98.636; evalue=1.54e-107; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008270	zinc ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.046; coverage=98.636; evalue=1.54e-107; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031267	small GTPase binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=63.256; coverage=97.727; evalue=1.32e-96; UniProt GO evidence=IPI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=63.256; coverage=97.727; evalue=1.32e-96; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051879	Hsp90 protein binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.046; coverage=98.636; evalue=1.54e-107; UniProt GO evidence=IPI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G51700	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.046; coverage=98.636; evalue=1.54e-107	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	xla:414542	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.769; coverage=106.364; evalue=9.79e-29	UniProtKB/Swiss-Prot DAT 2026 current_release