Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_011644 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:168757903-168759999 (+) |
| Description | Similar to ARP3: Actin-related protein 3 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_011644 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 36 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g13180 |
Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os02g0596900 |
Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | No verified direct reference in this release |
UniProt: A2X6S3 |
Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000902 | cell morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.991; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006887 | exocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IEP:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006909 | phagocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IEP:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007015 | actin filament organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.991; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009617 | response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=HEP:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009825 | multidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.991; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010090 | trichome morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.991; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030041 | actin filament polymerization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IGI:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034314 | Arp2/3 complex-mediated actin nucleation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.991; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045010 | actin nucleation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=TAS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046689 | response to mercury ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001891 | phagocytic cup | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.991; coverage=100.0; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005856 | cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=82.831; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005885 | Arp2/3 protein complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.991; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005905 | clathrin-coated pit | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015629 | actin cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030027 | lamellipodium | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030175 | filopodium | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030670 | phagocytic vesicle membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030864 | cortical actin cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031143 | pseudopodium | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IC:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031252 | cell leading edge | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032195 | post-lysosomal vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042995 | cell projection | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045335 | phagocytic vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060187 | cell pole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061851 | leading edge of lamellipodium | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070685 | macropinocytic cup | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097203 | phagocytic cup lip | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003779 | actin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.991; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005200 | structural constituent of cytoskeleton | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.991; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.991; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051015 | actin filament binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0; UniProt GO evidence=TAS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G13180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.991; coverage=100.0; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0283755 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.417; coverage=100.232; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os02g0596900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.831; coverage=100.0; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |