Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_010437 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:146558148-146558927 (+) |
| Description | Similar to ARPC5A: Actin-related protein 2/3 complex subunit 5A (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_010437 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 30 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g01710 |
Functions as a component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (By similarity). | No verified direct reference in this release |
At5g65274 |
Functions as a component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006887 | exocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.743; coverage=85.606; evalue=1.23e-12; UniProt GO evidence=IEP:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006909 | phagocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.743; coverage=85.606; evalue=1.23e-12; UniProt GO evidence=IEP:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007015 | actin filament organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.879; coverage=100.0; evalue=6.35e-83; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009825 | multidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.879; coverage=100.0; evalue=6.35e-83; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010090 | trichome morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.879; coverage=100.0; evalue=6.35e-83; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0014909 | smooth muscle cell migration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.132; coverage=80.303; evalue=3.1e-11; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016477 | cell migration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.189; coverage=80.303; evalue=5.45e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030011 | maintenance of cell polarity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.132; coverage=80.303; evalue=3.1e-11; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030036 | actin cytoskeleton organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.879; coverage=100.0; evalue=6.35e-83; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030041 | actin filament polymerization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.879; coverage=100.0; evalue=6.35e-83; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030833 | regulation of actin filament polymerization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.879; coverage=100.0; evalue=6.35e-83; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034314 | Arp2/3 complex-mediated actin nucleation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.879; coverage=100.0; evalue=6.35e-83; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045010 | actin nucleation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.743; coverage=85.606; evalue=1.23e-12; UniProt GO evidence=TAS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051639 | actin filament network formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.132; coverage=80.303; evalue=3.1e-11; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061842 | microtubule organizing center localization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.132; coverage=80.303; evalue=3.1e-11; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097581 | lamellipodium organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.132; coverage=80.303; evalue=3.1e-11; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.189; coverage=80.303; evalue=5.45e-12; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.879; coverage=100.0; evalue=6.35e-83; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.132; coverage=80.303; evalue=3.1e-11; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.743; coverage=85.606; evalue=1.23e-12; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005885 | Arp2/3 protein complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.879; coverage=100.0; evalue=6.35e-83; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030027 | lamellipodium | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.132; coverage=80.303; evalue=3.1e-11; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030863 | cortical cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.879; coverage=100.0; evalue=6.35e-83; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031143 | pseudopodium | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.743; coverage=85.606; evalue=1.23e-12; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035861 | site of double-strand break | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.189; coverage=80.303; evalue=5.45e-12; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042995 | cell projection | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.879; coverage=100.0; evalue=6.35e-83; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003779 | actin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.879; coverage=100.0; evalue=6.35e-83; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005200 | structural constituent of cytoskeleton | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.132; coverage=80.303; evalue=3.1e-11; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030674 | protein-macromolecule adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.879; coverage=100.0; evalue=6.35e-83; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051015 | actin filament binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.743; coverage=85.606; evalue=1.23e-12; UniProt GO evidence=TAS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G01710 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.879; coverage=100.0; evalue=6.35e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G65274 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.031; coverage=96.97; evalue=9.34e-74 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0288319 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.743; coverage=85.606; evalue=1.23e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:360854 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.132; coverage=80.303; evalue=3.1e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:446537 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.189; coverage=80.303; evalue=5.45e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release |