Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_009884 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:135339864-135344225 (+) |
| Description | Similar to SWI2: Switch 2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_009884 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 25 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g03750 |
May be involved in early DNA damage response (By similarity). | |
At3g19210 |
Dissociates RAD51 from nucleoprotein filaments formed on dsDNA. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000724 | double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.77; coverage=63.656; evalue=1.27e-76; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.973; coverage=71.183; evalue=2.34e-136; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007131 | reciprocal meiotic recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.77; coverage=63.656; evalue=1.27e-76; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010332 | response to gamma radiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.77; coverage=63.656; evalue=1.27e-76; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034614 | cellular response to reactive oxygen species | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.973; coverage=71.183; evalue=2.34e-136; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036297 | interstrand cross-link repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.938; coverage=95.161; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045003 | double-strand break repair via synthesis-dependent strand annealing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.77; coverage=63.656; evalue=1.27e-76; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.77; coverage=63.656; evalue=1.27e-76; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051701 | biological process involved in interaction with host | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.77; coverage=63.656; evalue=1.27e-76; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071248 | cellular response to metal ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.77; coverage=63.656; evalue=1.27e-76; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071480 | cellular response to gamma radiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.77; coverage=63.656; evalue=1.27e-76; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097680 | double-strand break repair via classical nonhomologous end joining | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.973; coverage=71.183; evalue=2.34e-136; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000775 | chromosome, centromeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.973; coverage=71.183; evalue=2.34e-136; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.938; coverage=95.161; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.973; coverage=71.183; evalue=2.34e-136; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.973; coverage=71.183; evalue=2.34e-136; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.973; coverage=71.183; evalue=2.34e-136; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005813 | centrosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.973; coverage=71.183; evalue=2.34e-136; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.973; coverage=71.183; evalue=2.34e-136; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.938; coverage=95.161; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004386 | helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.938; coverage=95.161; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.938; coverage=95.161; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015616 | DNA translocase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.77; coverage=63.656; evalue=1.27e-76; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016787 | hydrolase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.938; coverage=95.161; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019901 | protein kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.973; coverage=71.183; evalue=2.34e-136; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G03750 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.938; coverage=95.161; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G19210 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.77; coverage=63.656; evalue=1.27e-76 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:375748 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.652; coverage=70.538; evalue=7.85e-131 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:76251 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.973; coverage=71.183; evalue=2.34e-136 | UniProtKB/Swiss-Prot DAT 2026 current_release |