Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_009785`
Query reference	OH1004
Location	Chr02:133355696-133359064 (-)
Description	Similar to ATXR2: Histone-lysine N-methyltransferase ATXR2 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_009785 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 18 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At3g21820`	Histone methyltransferase that methylates 'Lys-36' (H3K36me) of histone H3 to produce H3K36me3.	Arabidopsis ATXR2 deposits H3K36me3 at the promoters of LBD genes to facilitate cellular dedifferentiation.2017 · DOI: 10.1126/scisignal.aan0316 ATXR2 as a core regulator of de novo root organogenesis.2018 · DOI: 10.1080/15592324.2018.1449543 JMJ30-mediated demethylation of H3K9me3 drives tissue identity changes to promote callus formation in Arabidopsis.2018 · DOI: 10.1111/tpj.14002

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0002181	cytoplasmic translation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.439; coverage=71.548; evalue=2.02e-12; UniProt GO evidence=ISO:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010311	lateral root formation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.927; coverage=100.209; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032259	methylation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.927; coverage=100.209; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0040029	epigenetic regulation of gene expression	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.927; coverage=100.209; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045814	negative regulation of gene expression, epigenetic	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.579; coverage=35.774; evalue=1.3e-12; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0062211	root regeneration	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.927; coverage=100.209; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0141005	transposable element silencing by heterochromatin formation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.439; coverage=71.548; evalue=2.02e-12; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900249	positive regulation of cytoplasmic translational elongation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.579; coverage=35.774; evalue=1.3e-12; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000035	regulation of stem cell division	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.579; coverage=35.774; evalue=1.3e-12; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000736	regulation of stem cell differentiation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.579; coverage=35.774; evalue=1.3e-12; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.927; coverage=100.209; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.579; coverage=35.774; evalue=1.3e-12; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008270	zinc ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.927; coverage=100.209; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016279	protein-lysine N-methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.579; coverage=35.774; evalue=1.3e-12; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042799	histone H4K20 methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.579; coverage=35.774; evalue=1.3e-12; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046975	histone H3K36 methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.927; coverage=100.209; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0140943	histone H4K20 trimethyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.579; coverage=35.774; evalue=1.3e-12; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0140955	histone H3K36 trimethyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.579; coverage=35.774; evalue=1.3e-12; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G21820	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.927; coverage=100.209; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	gga:422951	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.579; coverage=35.774; evalue=1.3e-12	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	hsa:10322	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.579; coverage=35.774; evalue=1.08e-10	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	mmu:232187	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.439; coverage=71.548; evalue=2.02e-12	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	xla:444061	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.27; coverage=38.703; evalue=1.1e-10	UniProtKB/Swiss-Prot DAT 2026 current_release