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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_009669
Query referenceOH1004
LocationChr02:130936598-130940025 (-)
DescriptionSimilar to REL2: Protein ROLLING AND ERECT LEAF 2 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_009669 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 9 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g51290 Required for the coordination of cell differentiation and cell elongation in the root tip. No verified direct reference in this release
At3g60320 Required for nitrate signaling.
The Arabidopsis NRG2 Protein Mediates Nitrate Signaling and Interacts with and Regulates Key Nitrate Regulators.2016 · DOI: 10.1105/tpc.15.00567

Rice

Reference gene IDPossible functionPapers / DOI
Os10g0562700 Involved in the regulation of leaf shape formation. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.258; coverage=63.315; evalue=2.74e-50; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010073meristem maintenanceBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.937; coverage=62.364; evalue=3.43e-62; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010167response to nitrateBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.258; coverage=63.315; evalue=2.74e-50; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015706nitrate transmembrane transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.258; coverage=63.315; evalue=2.74e-50; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030154cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.308; coverage=61.821; evalue=7.3e-64; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071249cellular response to nitrateBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.258; coverage=63.315; evalue=2.74e-50; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071705nitrogen compound transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.258; coverage=63.315; evalue=2.74e-50; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.937; coverage=62.364; evalue=3.43e-62; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.308; coverage=61.821; evalue=7.3e-64; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G51290KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.937; coverage=62.364; evalue=3.43e-62UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G60320KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.258; coverage=63.315; evalue=2.74e-50UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os10g0562700KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.308; coverage=61.821; evalue=7.3e-64UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4349394KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.308; coverage=61.821; evalue=7.3e-64UniProtKB/Swiss-Prot DAT 2026 current_release