Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_009663 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:130897275-130898280 (+) |
| Description | Similar to SKP1A: SKP1-like protein 1A (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_009663 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 25 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g75950 |
Involved in ubiquitination and subsequent proteasomal degradation of target proteins. |
The Arabidopsis SKP1-LIKE1 gene is essential for male meiosis and may control homologue separation.1999 · DOI: 10.1073/pnas.96.20.11416 The ASK1 gene regulates development and interacts with the UFO gene to control floral organ identity in Arabidopsis.1999 · DOI: 10.1002/(sici)1520-6408(1999)25:3<209::aid-dvg4>3.0.co;2-o The ASK1 gene regulates B function gene expression in cooperation with UFO and LEAFY in Arabidopsis.2001 · DOI: 10.1242/dev.128.14.2735
|
At1g20140 |
Involved in ubiquitination and subsequent proteasomal degradation of target proteins. | No verified direct reference in this release |
At5g42190 |
Involved in ubiquitination and subsequent proteasomal degradation of target proteins. | No verified direct reference in this release |
At4g34210 |
Involved in ubiquitination and subsequent proteasomal degradation of target proteins. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os09g0539500 |
Involved in ubiquitination and subsequent proteasomal degradation of target proteins. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000226 | microtubule cytoskeleton organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000278 | mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007059 | chromosome segregation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007140 | male meiotic nuclear division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=IMP:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009753 | response to jasmonic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=73.529; coverage=108.974; evalue=1.75e-78; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009867 | jasmonic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009873 | ethylene-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045910 | negative regulation of DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000151 | ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=69.939; coverage=104.487; evalue=1.31e-78; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005819 | spindle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009524 | phragmoplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=73.529; coverage=108.974; evalue=1.75e-78; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019005 | SCF ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=69.939; coverage=104.487; evalue=1.31e-78; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097602 | cullin family protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G20140 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=69.939; coverage=104.487; evalue=1.31e-78 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G75950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.358; coverage=101.923; evalue=2.44e-79 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G34210 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.242; coverage=98.077; evalue=3.12e-74 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G42190 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=73.529; coverage=108.974; evalue=1.75e-78 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os09g0539500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.345; coverage=109.615; evalue=1.74e-76 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4347721 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.345; coverage=109.615; evalue=1.74e-76 | UniProtKB/Swiss-Prot DAT 2026 current_release |