Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_009543`
Query reference	OH1004
Location	Chr02:128694177-128695291 (+)
Description	Similar to ISU1: Iron-sulfur cluster assembly protein 1 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_009543 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At4g22220`	Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Isolation and characterization of Arabidopsis thaliana ISU1 gene.2004 · DOI: 10.1016/j.bbaexp.2004.09.005 Functional analysis of Arabidopsis genes involved in mitochondrial iron-sulfur cluster assembly.2007 · DOI: 10.1007/s11103-007-9147-x
`At4g04080`	Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Functional analysis of Arabidopsis genes involved in mitochondrial iron-sulfur cluster assembly.2007 · DOI: 10.1007/s11103-007-9147-x

Rice

Reference gene ID	Possible function	Papers / DOI
`Os01g0662600`	Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (Probable).	Stage- and tissue-specific expression of rice OsIsu1 gene encoding a scaffold protein for mitochondrial iron-sulfur-cluster biogenesis.2009 · DOI: 10.1007/s10529-009-0004-7

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0002098	tRNA wobble uridine modification	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=67.532; coverage=90.588; evalue=2.28e-71; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006879	intracellular iron ion homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.706; coverage=100.0; evalue=2.58e-86; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016226	iron-sulfur cluster assembly	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.449; coverage=98.235; evalue=3.57e-85; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0044571	[2Fe-2S] cluster assembly	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.706; coverage=100.0; evalue=2.58e-86; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0044572	[4Fe-4S] cluster assembly	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.706; coverage=100.0; evalue=2.58e-86; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.706; coverage=100.0; evalue=2.58e-86; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.449; coverage=98.235; evalue=3.57e-85; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005759	mitochondrial matrix	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.706; coverage=100.0; evalue=2.58e-86; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.449; coverage=98.235; evalue=3.57e-85; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.939; coverage=95.882; evalue=2.99e-76; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005198	structural molecule activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.449; coverage=98.235; evalue=3.57e-85; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005506	iron ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=67.532; coverage=90.588; evalue=2.28e-71; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008198	ferrous iron binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.706; coverage=100.0; evalue=2.58e-86; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051537	2 iron, 2 sulfur cluster binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.706; coverage=100.0; evalue=2.58e-86; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G04080	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.939; coverage=95.882; evalue=2.99e-76	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G22220	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.449; coverage=98.235; evalue=3.57e-85	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dha:DEHA2G23958g	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.875; coverage=94.118; evalue=4.76e-69	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os01g0662600	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.706; coverage=100.0; evalue=2.58e-86	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	kla:KLLA0_D07161g	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=67.532; coverage=90.588; evalue=2.28e-71	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4327858	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.706; coverage=100.0; evalue=2.58e-86	UniProtKB/Swiss-Prot DAT 2026 current_release