Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_009443 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:126686029-126689367 (-) |
| Description | Similar to TTC37: Tetratricopeptide repeat protein 37 (Homo sapiens OX%3D9606) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_009443 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 24 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g04240 |
O-linked N-acetylglucosamine transferase (OGT) that mediates O-glycosylation of capsid protein (CP) of virus in case of infection by Plum pox virus. | No verified direct reference in this release |
At3g11540 |
Probable O-linked N-acetylglucosamine transferase (OGT) involved in various processes such as gibberellin (GA) signaling pathway and circadian clock. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000956 | nuclear-transcribed mRNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.402; coverage=51.603; evalue=5.2e-13; UniProt GO evidence=IPI:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006493 | protein O-linked glycosylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.684; coverage=46.412; evalue=2.08e-10; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009736 | cytokinin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.129; coverage=56.947; evalue=2.76e-10; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009740 | gibberellic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.129; coverage=56.947; evalue=2.76e-10; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.129; coverage=56.947; evalue=2.76e-10; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009910 | negative regulation of flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.684; coverage=46.412; evalue=2.08e-10; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009938 | negative regulation of gibberellic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.129; coverage=56.947; evalue=2.76e-10; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010228 | vegetative to reproductive phase transition of meristem | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.684; coverage=46.412; evalue=2.08e-10; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030154 | cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.129; coverage=56.947; evalue=2.76e-10; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036066 | protein O-linked glycosylation via fucose | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.129; coverage=56.947; evalue=2.76e-10; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048511 | rhythmic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.129; coverage=56.947; evalue=2.76e-10; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070478 | nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.402; coverage=51.603; evalue=5.2e-13; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072344 | rescue of stalled cytosolic ribosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.402; coverage=51.603; evalue=5.2e-13; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000377 | regulation of reactive oxygen species metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.129; coverage=56.947; evalue=2.76e-10; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000791 | euchromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.402; coverage=51.603; evalue=5.2e-13; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.402; coverage=51.603; evalue=5.2e-13; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.402; coverage=51.603; evalue=5.2e-13; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.402; coverage=51.603; evalue=5.2e-13; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.402; coverage=51.603; evalue=5.2e-13; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055087 | Ski complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.402; coverage=51.603; evalue=5.2e-13; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016262 | protein N-acetylglucosaminyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.129; coverage=56.947; evalue=2.76e-10; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016757 | glycosyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.684; coverage=46.412; evalue=2.08e-10; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046922 | peptide-O-fucosyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.129; coverage=56.947; evalue=2.76e-10; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097363 | protein O-acetylglucosaminyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.684; coverage=46.412; evalue=2.08e-10; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G04240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.684; coverage=46.412; evalue=2.08e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G11540 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.129; coverage=56.947; evalue=2.76e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:9652 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=28.402; coverage=51.603; evalue=5.2e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:218343 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.164; coverage=51.145; evalue=9.06e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release |