RubberDandelionOmics Rubber Dandelion Multi-omics Website
More
Transcriptome Expression Annotation Rubber Pathway TF Prediction Targets Protein Network Resequencing Tools Downloads
ZH EN

How to use this page

Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene IDLXL04_009342
Query referenceOH1004
LocationChr02:123628984-123633268 (-)
DescriptionSimilar to TDL1: TPD1 protein homolog 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_009342 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 7 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g32583 TPD1 protein homolog 1. No verified direct reference in this release
At4g24972 Involved in cell specification during anther and pollen development.
Tapetum determinant1 is required for cell specialization in the Arabidopsis anther.2003 · DOI: 10.1105/tpc.016618
Overexpression of TAPETUM DETERMINANT1 alters the cell fates in the Arabidopsis carpel and tapetum via genetic interaction with excess microsporocytes1/extra sporogenous cells.2005 · DOI: 10.1104/pp.105.063529
Signaling of cell fate determination by the TPD1 small protein and EMS1 receptor kinase.2008 · DOI: 10.1073/pnas.0708795105
At1g05835 Uncharacterized protein At1g05835. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os12g0472500 Involved in cell specification during anther development.
OsTDL1A binds to the LRR domain of rice receptor kinase MSP1, and is required to limit sporocyte numbers.2008 · DOI: 10.1111/j.1365-313x.2008.03426.x
MIL2 (MICROSPORELESS2) regulates early cell differentiation in the rice anther.2012 · DOI: 10.1111/j.1469-8137.2012.04270.x
Os10g0207500 May play a role during anther development. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0001709cell fate determinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.6; coverage=35.92; evalue=3.2e-46; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009408response to heatBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.6; coverage=35.92; evalue=3.2e-46; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009556microsporogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.923; coverage=29.885; evalue=2.19e-33; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010234anther wall tapetum cell fate specificationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.923; coverage=29.885; evalue=2.19e-33; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048653anther developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.35; coverage=35.345; evalue=2.09e-43; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005576extracellular regionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.6; coverage=35.92; evalue=3.2e-46; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.35; coverage=35.345; evalue=2.09e-43; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G05835KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=39.744; coverage=22.414; evalue=2.64e-06UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G32583KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.6; coverage=35.92; evalue=3.2e-46UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G24972KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.35; coverage=35.345; evalue=2.09e-43UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os10g0207500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.113; coverage=30.46; evalue=2.18e-31UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os12g0472500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.923; coverage=29.885; evalue=2.19e-33UniProtKB/Swiss-Prot DAT 2026 current_release