Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_009165`
Query reference	OH1004
Location	Chr02:119432095-119433722 (+)
Description	Similar to At3g15890: PTI1-like tyrosine-protein kinase At3g15890 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_009165 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 27 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At3g15890`	PTI1-like tyrosine-protein kinase At3g15890.	No verified direct reference in this release
`At1g70460`	Negatively regulates root hair elongation.	No verified direct reference in this release
`At4g33430`	Dual specificity kinase acting on both serine/threonine- and tyrosine-containing substrates.	The BRI1-associated kinase 1, BAK1, has a brassinolide-independent role in plant cell-death control.2007 · DOI: 10.1016/j.cub.2007.05.046 BAK1 and BKK1 regulate brassinosteroid-dependent growth and brassinosteroid-independent cell-death pathways.2007 · DOI: 10.1016/j.cub.2007.05.036 Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE proteins serve brassinosteroid-dependent and -independent signaling pathways.2008 · DOI: 10.1104/pp.108.123216 Tyrosine phosphorylation of the BRI1 receptor kinase emerges as a component of brassinosteroid signaling in Arabidopsis.2009 · DOI: 10.1073/pnas.0810249106 Phosphorylation of receptor-like cytoplasmic kinases by bacterial flagellin.2010 · DOI: 10.4161/psb.11500 The Arabidopsis leucine-rich repeat receptor-like kinases BAK1/SERK3 and BKK1/SERK4 are required for innate immunity to hemibiotrophic and biotrophic pathogens.2011 · DOI: 10.1105/tpc.111.084301 Structure of the pseudokinase domain of BIR2, a regulator of BAK1-mediated immune signaling in Arabidopsis.2014 · DOI: 10.1016/j.jsb.2014.02.005 Phytosulfokine Regulates Growth in Arabidopsis through a Response Module at the Plasma Membrane That Includes CYCLIC NUCLEOTIDE-GATED CHANNEL17, H+-ATPase, and BAK1.2015 · DOI: 10.1105/tpc.15.00306 An RLP23-SOBIR1-BAK1 complex mediates NLP-triggered immunity.2015 · DOI: 10.1038/nplants.2015.140 The SCOOP12 peptide regulates defense response and root elongation in Arabidopsis thaliana.2019 · DOI: 10.1093/jxb/ery454 The Arabidopsis MIK2 receptor elicits immunity by sensing a conserved signature from phytocytokines and microbes.2021 · DOI: 10.1038/s41467-021-25580-w
`At3g24540`	Proline-rich receptor-like protein kinase PERK3.	No verified direct reference in this release
`At1g68690`	Could be involved in the negative regulation of root growth.	No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0002229	defense response to oomycetes	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006995	cellular response to nitrogen starvation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.169; coverage=82.24; evalue=5.36e-92; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0007165	signal transduction	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.842; coverage=96.721; evalue=1.92e-165; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009626	plant-type hypersensitive response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009742	brassinosteroid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016036	cellular response to phosphate starvation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.169; coverage=82.24; evalue=5.36e-92; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042742	defense response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050832	defense response to fungus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071456	cellular response to hypoxia	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.154; coverage=81.694; evalue=5.95e-88; UniProt GO evidence=HEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1990641	response to iron ion starvation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.169; coverage=82.24; evalue=5.36e-92; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.842; coverage=96.721; evalue=1.92e-165; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005768	endosome	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.842; coverage=96.721; evalue=1.92e-165; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010008	endosome membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032991	protein-containing complex	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004672	protein kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.842; coverage=96.721; evalue=1.92e-165; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004674	protein serine/threonine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.169; coverage=82.24; evalue=5.36e-92; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004714	transmembrane receptor protein tyrosine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004715	non-membrane spanning protein tyrosine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.842; coverage=96.721; evalue=1.92e-165; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005102	signaling receptor binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89; UniProt GO evidence=IPI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005524	ATP binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.842; coverage=96.721; evalue=1.92e-165; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0019901	protein kinase binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.169; coverage=82.24; evalue=5.36e-92; UniProt GO evidence=IPI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0033612	receptor serine/threonine kinase binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89; UniProt GO evidence=IPI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042802	identical protein binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89; UniProt GO evidence=IPI:IntAct	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046982	protein heterodimerization activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0106310	protein serine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.169; coverage=82.24; evalue=5.36e-92; UniProt GO evidence=IEA:RHEA	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G68690	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.154; coverage=81.694; evalue=5.95e-88	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G70460	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.169; coverage=82.24; evalue=5.36e-92	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G15890	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.842; coverage=96.721; evalue=1.92e-165	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G33430	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.732; coverage=83.607; evalue=1.75e-89	UniProtKB/Swiss-Prot DAT 2026 current_release