Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_009021`
Query reference	OH1004
Location	Chr02:116300233-116301134 (-)
Description	Similar to PAS1: Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_009021 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 28 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At3g54010`	PPIases accelerate the folding of proteins.	Very-long-chain fatty acids are involved in polar auxin transport and developmental patterning in Arabidopsis.2010 · DOI: 10.1105/tpc.109.071209 The PASTICCINO genes of Arabidopsis thaliana are involved in the control of cell division and differentiation.1998 · DOI: 10.1242/dev.125.5.909 Mutation in the Arabidopsis PASTICCINO1 gene, which encodes a new FK506-binding protein-like protein, has a dramatic effect on plant development.1998 · DOI: 10.1128/mcb.18.5.3034
`At3g25230`	PPIases accelerate the folding of proteins.	Arabidopsis immunophilins ROF1 (AtFKBP62) and ROF2 (AtFKBP65) exhibit tissue specificity, are heat-stress induced, and bind HSP90.2007 · DOI: 10.1007/s11103-006-9085-z Arabidopsis ROF1 (FKBP62) modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.2009 · DOI: 10.1111/j.1365-313x.2009.03878.x
`At5g48570`	PPIases accelerate the folding of proteins.	Involvement of Arabidopsis ROF2 (FKBP65) in thermotolerance.2010 · DOI: 10.1007/s11103-009-9561-3 Peptidyl-prolyl cis-trans isomerase ROF2 modulates intracellular pH homeostasis in Arabidopsis.2012 · DOI: 10.1111/j.1365-313x.2012.04921.x Characterization of three Arabidopsis thaliana immunophilin genes involved in the plant defense response against Pseudomonas syringae.2014 · DOI: 10.1016/j.gene.2014.01.029

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006457	protein folding	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006970	response to osmotic stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.391; coverage=62.585; evalue=4.27e-12; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009408	response to heat	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.391; coverage=62.585; evalue=4.27e-12; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009611	response to wounding	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.391; coverage=62.585; evalue=4.27e-12; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009644	response to high light intensity	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.391; coverage=62.585; evalue=4.27e-12; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009734	auxin-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009735	response to cytokinin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009736	cytokinin-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009793	embryo development ending in seed dormancy	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009826	unidimensional cell growth	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009845	seed germination	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.391; coverage=62.585; evalue=4.27e-12; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009880	embryonic pattern specification	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030010	establishment of cell polarity	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030154	cell differentiation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042761	very long-chain fatty acid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048364	root development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048527	lateral root development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0070370	cellular heat acclimation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.111; coverage=73.469; evalue=6.34e-13; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.391; coverage=62.585; evalue=4.27e-12; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005783	endoplasmic reticulum	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005789	endoplasmic reticulum membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.391; coverage=62.585; evalue=4.27e-12; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071944	cell periphery	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.391; coverage=62.585; evalue=4.27e-12; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005516	calmodulin binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.111; coverage=73.469; evalue=6.34e-13; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032266	phosphatidylinositol-3-phosphate binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.391; coverage=62.585; evalue=4.27e-12; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.391; coverage=62.585; evalue=4.27e-12; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G25230	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.391; coverage=62.585; evalue=4.27e-12	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G54010	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=89.796; evalue=1.89e-48	UniProtKB/Swiss-Prot DAT 2026 current_release