Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_008657 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:105392878-105394074 (+) |
| Description | Similar to NAC079: NAC domain-containing protein 79 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_008657 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 27 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g07680 |
NAC domain-containing protein 79. | No verified direct reference in this release |
At5g61430 |
Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. | No verified direct reference in this release |
At5g39610 |
Transcription activator that binds to DNA in promoters of target genes on a specific bipartite motif 5'-[ACG][CA]GT[AG](5-6n)[CT]AC[AG]-3'. |
The delayed leaf senescence mutants of Arabidopsis, ore1, ore3, and ore9 are tolerant to oxidative stress.2004 · DOI: 10.1093/pcp/pch110 Trifurcate feed-forward regulation of age-dependent cell death involving miR164 in Arabidopsis.2009 · DOI: 10.1126/science.1166386 Forward and reverse genetics to identify genes involved in the age-related resistance response in Arabidopsis thaliana.2009 · DOI: 10.1111/j.1364-3703.2009.00557.x A gene regulatory network controlled by the NAC transcription factor ANAC092/AtNAC2/ORE1 during salt-promoted senescence.2010 · DOI: 10.1111/j.1365-313x.2010.04151.x ORS1, an H₂O₂-responsive NAC transcription factor, controls senescence in Arabidopsis thaliana.2011 · DOI: 10.1093/mp/ssq080
|
At3g29035 |
Transcription activator that binds to DNA in promoters of target genes on a specific bipartite motif 5'-[AG]CGT[AG](4- 5n)[AG][CT]ACGCAA-3'. | |
At3g04060 |
Transcriptional activator that acts as a positive regulator of leaf senescence. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.982; coverage=98.525; evalue=1.15e-130; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006979 | response to oxidative stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009611 | response to wounding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.353; coverage=100.295; evalue=3.23e-94; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009723 | response to ethylene | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010029 | regulation of seed germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010150 | leaf senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042542 | response to hydrogen peroxide | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043068 | positive regulation of programmed cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048527 | lateral root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080187 | floral organ senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090400 | stress-induced premature senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900057 | positive regulation of leaf senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902074 | response to salt | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903648 | positive regulation of chlorophyll catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=65.347; coverage=59.587; evalue=4.01e-90; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904250 | positive regulation of age-related resistance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990641 | response to iron ion starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.587; coverage=102.95; evalue=2.46e-123; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.982; coverage=98.525; evalue=1.15e-130; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.982; coverage=98.525; evalue=1.15e-130; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.982; coverage=98.525; evalue=1.15e-130; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005509 | calcium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=65.347; coverage=59.587; evalue=4.01e-90; UniProt GO evidence=EXP:DisProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G04060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=65.347; coverage=59.587; evalue=4.01e-90 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G29035 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.353; coverage=100.295; evalue=3.23e-94 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G07680 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.982; coverage=98.525; evalue=1.15e-130 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G39610 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=58.635; coverage=73.451; evalue=7.96e-98 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G61430 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.587; coverage=102.95; evalue=2.46e-123 | UniProtKB/Swiss-Prot DAT 2026 current_release |