Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_008510 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:101572442-101576723 (+) |
| Description | Similar to XRCC1: DNA-repair protein XRCC1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_008510 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 30 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g80420 |
Corrects defective DNA strand-break repair and sister chromatid exchange following treatment with ionizing radiation and alkylating agents (By similarity). |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000012 | single strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.157; coverage=95.187; evalue=4.32e-107; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001666 | response to hypoxia | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.37; coverage=28.877; evalue=1.35e-22; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.444; coverage=28.877; evalue=6.49e-23; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006282 | regulation of DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006284 | base-excision repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.157; coverage=95.187; evalue=4.32e-107; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006302 | double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006303 | double-strand break repair via nonhomologous end joining | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.157; coverage=95.187; evalue=4.32e-107; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.37; coverage=28.877; evalue=1.35e-22; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009410 | response to xenobiotic stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.37; coverage=28.877; evalue=1.35e-22; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010836 | negative regulation of protein ADP-ribosylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033194 | response to hydroperoxide | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061819 | telomeric DNA-containing double minutes formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905051 | regulation of base-excision repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905765 | negative regulation of protection from non-homologous end joining at telomere | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.157; coverage=95.187; evalue=4.32e-107; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=48.936; coverage=25.134; evalue=5.49e-21; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070522 | ERCC4-ERCC1 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090734 | site of DNA damage | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003684 | damaged DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.157; coverage=95.187; evalue=4.32e-107; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010385 | double-stranded methylated DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.157; coverage=95.187; evalue=4.32e-107; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019899 | enzyme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IPI:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032356 | oxidized DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072572 | poly-ADP-D-ribose binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0160002 | ADP-D-ribose modification-dependent protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990165 | single-strand break-containing DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990599 | 3' overhang single-stranded DNA endodeoxyribonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G80420 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.157; coverage=95.187; evalue=4.32e-107 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cge:100689414 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=48.936; coverage=25.134; evalue=5.49e-21 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:7515 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.363; coverage=30.214; evalue=2.13e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:22594 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.444; coverage=28.877; evalue=6.49e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:84495 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.37; coverage=28.877; evalue=1.35e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release |