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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_008246
Query referenceOH1004
LocationChr02:94727136-94742555 (-)
DescriptionSimilar to SLC25A44: Solute carrier family 25 member 44 (Homo sapiens OX%3D9606)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_008246 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 21 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g67120 Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits.
The MIDASIN and NOTCHLESS genes are essential for female gametophyte development in Arabidopsis thaliana.2010 · DOI: 10.1007/s12298-010-0005-y
The Mutation of Glu at Amino Acid 3838 of AtMDN1 Provokes Pleiotropic Developmental Phenotypes in Arabidopsis.2016 · DOI: 10.1038/srep36446

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000027ribosomal large subunit assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=6.562; evalue=9.35e-20; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006865amino acid transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.634; coverage=21.178; evalue=4.09e-27; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009083branched-chain amino acid catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.634; coverage=21.178; evalue=4.09e-27; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009553embryo sac developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=6.562; evalue=9.35e-20; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009738abscisic acid-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=6.562; evalue=9.35e-20; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015803branched-chain amino acid transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.634; coverage=21.178; evalue=4.09e-27; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048638regulation of developmental growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=6.562; evalue=9.35e-20; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0055085transmembrane transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.231; coverage=21.924; evalue=2.03e-22; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0120161regulation of cold-induced thermogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.634; coverage=21.178; evalue=4.09e-27; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=6.562; evalue=9.35e-20; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=6.562; evalue=9.35e-20; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=6.562; evalue=9.35e-20; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=6.562; evalue=9.35e-20; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.634; coverage=21.178; evalue=4.09e-27; UniProt GO evidence=HTP:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005743mitochondrial inner membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=29.893; coverage=20.955; evalue=1.29e-25; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=6.562; evalue=9.35e-20; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009941chloroplast envelopeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=6.562; evalue=9.35e-20; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031966mitochondrial membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.634; coverage=21.178; evalue=4.09e-27; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=6.562; evalue=9.35e-20; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015658branched-chain amino acid transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.634; coverage=21.178; evalue=4.09e-27; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016887ATP hydrolysis activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=6.562; evalue=9.35e-20; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G67120KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=6.562; evalue=9.35e-20UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGddi:DDB_G0280083KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.231; coverage=21.924; evalue=2.03e-22UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:9673KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.634; coverage=21.178; evalue=4.09e-27UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:229517KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=29.893; coverage=20.955; evalue=1.29e-25UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGpon:100172017KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.634; coverage=21.178; evalue=6.03e-27UniProtKB/Swiss-Prot DAT 2026 current_release