Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_007452 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:48929443-48932085 (-) |
| Description | Similar to MRL7L: Thioredoxin-like fold domain-containing protein MRL7L%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_007452 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 8 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g31840 |
Plays an essential role in early steps of chloroplast development. | No verified direct reference in this release |
At4g28590 |
Plays an essential role in early steps of chloroplast development. |
Two novel proteins, MRL7 and its paralog MRL7-L, have essential but functionally distinct roles in chloroplast development and are involved in plastid gene expression regulation in Arabidopsis.2011 · DOI: 10.1093/pcp/pcr054 AtECB1/MRL7, a thioredoxin-like fold protein with disulfide reductase activity, regulates chloroplast gene expression and chloroplast biogenesis in Arabidopsis thaliana.2014 · DOI: 10.1093/mp/sst092
|
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os05g0417200 |
Plays an essential role in early steps of chloroplast development. | No verified direct reference in this release |
Os01g0829000 |
Plays an essential role in early steps of chloroplast development. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.414; coverage=66.022; evalue=6.6e-90; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009266 | response to temperature stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.118; coverage=46.961; evalue=4.73e-35; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009646 | response to absence of light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.414; coverage=66.022; evalue=6.6e-90; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009658 | chloroplast organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.414; coverage=66.022; evalue=6.6e-90; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.414; coverage=66.022; evalue=6.6e-90; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.414; coverage=66.022; evalue=6.6e-90; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.414; coverage=66.022; evalue=6.6e-90; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042644 | chloroplast nucleoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.633; coverage=48.895; evalue=4.5e-35; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G31840 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.414; coverage=66.022; evalue=6.6e-90 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G28590 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.118; coverage=46.961; evalue=4.73e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0829000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.633; coverage=48.895; evalue=4.5e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os05g0417200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.942; coverage=66.575; evalue=3.29e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release |