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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_007416
Query referenceOH1004
LocationChr02:47268013-47268255 (+)
DescriptionSimilar to MDHG: Malate dehydrogenase%2C glyoxysomal (Cucumis sativus OX%3D3659)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_007416 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 10 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g22780 Catalyzes a reversible NAD-dependent dehydrogenase reaction involved in central metabolism and redox homeostasis between organelle compartments (Probable).
Fatty acid beta-oxidation in germinating Arabidopsis seeds is supported by peroxisomal hydroxypyruvate reductase when malate dehydrogenase is absent.2010 · DOI: 10.1007/s11103-009-9554-2

Rice

Reference gene IDPossible functionPapers / DOI
Os12g0632700 Malate dehydrogenase, glyoxysomal. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006097glyoxylate cycleBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.857; coverage=43.75; evalue=6.5e-12; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006099tricarboxylic acid cycleBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.857; coverage=43.75; evalue=6.5e-12; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006108malate metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.857; coverage=43.75; evalue=6.5e-12; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031998regulation of fatty acid beta-oxidationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=78.125; coverage=40.0; evalue=3.06e-09; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080093regulation of photorespirationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=78.125; coverage=40.0; evalue=3.06e-09; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=78.125; coverage=40.0; evalue=3.06e-09; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005777peroxisomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=78.125; coverage=40.0; evalue=3.06e-09; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=80.0; coverage=43.75; evalue=2.77e-11; UniProt GO evidence=IEA:TreeGrafterUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009514glyoxysomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.857; coverage=43.75; evalue=6.5e-12; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030060L-malate dehydrogenase (NAD+) activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.857; coverage=43.75; evalue=6.5e-12; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G22780KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=78.125; coverage=40.0; evalue=3.06e-09UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbna:106382950KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=75.758; coverage=41.25; evalue=1.23e-08UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGcsv:101219252KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.857; coverage=43.75; evalue=6.5e-12UniProtKB/Swiss-Prot DAT 2026 current_release