Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_006736 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:23614003-23615863 (-) |
| Description | Similar to SEND1: Single-strand DNA endonuclease 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_006736 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 25 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
UniProt: Q9M2Z3 |
Endonuclease which cleaves flap structures at the junction between single-stranded DNA and double-stranded DNA with a specific cleavage site in the 5' overhang strand exactly one nucleotide 3' of the branch point. | No verified direct reference in this release |
At3g28030 |
Putative single-stranded DNA endonuclease involved in nucleotide excision repair (NER) of UV- and oxidative damaged DNA. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os08g0101600 |
Single-stranded DNA endonuclease activity in vitro. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000723 | telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.227; coverage=77.273; evalue=5.05e-109; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000724 | double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.22; coverage=72.403; evalue=7.68e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.227; coverage=77.273; evalue=5.05e-109; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006289 | nucleotide-excision repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.384; coverage=49.026; evalue=1.02e-27; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009408 | response to heat | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.384; coverage=49.026; evalue=1.02e-27; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009650 | UV protection | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.227; coverage=77.273; evalue=5.05e-109; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010213 | non-photoreactive DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.384; coverage=49.026; evalue=1.02e-27; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010824 | regulation of centrosome duplication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.22; coverage=72.403; evalue=7.68e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031297 | replication fork processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.22; coverage=72.403; evalue=7.68e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071139 | resolution of DNA recombination intermediates | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.22; coverage=72.403; evalue=7.68e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071140 | resolution of mitotic recombination intermediates | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.22; coverage=72.403; evalue=7.68e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090267 | positive regulation of mitotic cell cycle spindle assembly checkpoint | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.22; coverage=72.403; evalue=7.68e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.227; coverage=77.273; evalue=5.05e-109; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.874; coverage=72.403; evalue=2.07e-35; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005813 | centrosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.22; coverage=72.403; evalue=7.68e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000287 | magnesium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.22; coverage=72.403; evalue=7.68e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000400 | four-way junction DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.22; coverage=72.403; evalue=7.68e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=62.393; coverage=75.974; evalue=4.11e-95; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003697 | single-stranded DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.384; coverage=49.026; evalue=1.02e-27; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004520 | DNA endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.384; coverage=49.026; evalue=1.02e-27; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008821 | crossover junction DNA endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.227; coverage=77.273; evalue=5.05e-109; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016788 | hydrolase activity, acting on ester bonds | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.384; coverage=49.026; evalue=1.02e-27; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017108 | 5'-flap endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.227; coverage=77.273; evalue=5.05e-109; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.22; coverage=72.403; evalue=7.68e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.227; coverage=77.273; evalue=5.05e-109; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G48900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.227; coverage=77.273; evalue=5.05e-109 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os08g0101600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=62.393; coverage=75.974; evalue=4.11e-95 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:348654 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.874; coverage=72.403; evalue=2.07e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:209334 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.22; coverage=72.403; evalue=7.68e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release |