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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_006169
Query referenceOH1004
LocationChr02:3009223-3013099 (+)
DescriptionSimilar to CSLC4: Xyloglucan glycosyltransferase 4 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_006169 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 10 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g28180 Beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose.
A gene from the cellulose synthase-like C family encodes a beta-1,4 glucan synthase.2007 · DOI: 10.1073/pnas.0703133104
Protein-protein interactions among xyloglucan-synthesizing enzymes and formation of Golgi-localized multiprotein complexes.2015 · DOI: 10.1093/pcp/pcu161
At2g24630 Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. No verified direct reference in this release
At4g31590 Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os09g0428000 Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. No verified direct reference in this release
UniProt: Q7PC70 Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0048868pollen tube developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.368; coverage=103.323; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071555cell wall organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.368; coverage=103.323; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0099402plant organ developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.368; coverage=103.323; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000138Golgi trans cisternaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.368; coverage=103.323; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000139Golgi membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.368; coverage=103.323; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005768endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.368; coverage=103.323; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.368; coverage=103.323; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005802trans-Golgi networkCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.368; coverage=103.323; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016757glycosyltransferase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.368; coverage=103.323; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042803protein homodimerization activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.368; coverage=103.323; evalue=0.0; UniProt GO evidence=IPI:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G24630KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=67.899; coverage=102.115; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G28180KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.368; coverage=103.323; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G31590KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.456; coverage=102.115; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os09g0428000KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=65.249; coverage=103.021; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release