Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_006007 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:176876165-176880270 (-) |
| Description | Similar to 1MMP: Metalloendoproteinase 1-MMP (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_006007 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 19 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g16640 |
Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses. | No verified direct reference in this release |
At2g45040 |
Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (By similarity). | No verified direct reference in this release |
At1g70170 |
Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (By similarity). | No verified direct reference in this release |
At1g24140 |
Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (By similarity). | No verified direct reference in this release |
At1g59970 |
Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (By similarity). | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006508 | proteolysis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=87.5; evalue=1.66e-121; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.361; coverage=90.931; evalue=4.68e-93; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009753 | response to jasmonic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.361; coverage=90.931; evalue=4.68e-93; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030198 | extracellular matrix organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=87.5; evalue=1.66e-121; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030574 | collagen catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=87.5; evalue=1.66e-121; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046686 | response to cadmium ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.361; coverage=90.931; evalue=4.68e-93; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.361; coverage=90.931; evalue=4.68e-93; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080186 | developmental vegetative growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.361; coverage=90.931; evalue=4.68e-93; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900056 | negative regulation of leaf senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.361; coverage=90.931; evalue=4.68e-93; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000028 | regulation of photoperiodism, flowering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.361; coverage=90.931; evalue=4.68e-93; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=87.5; evalue=1.66e-121; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=87.5; evalue=1.66e-121; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=87.5; evalue=1.66e-121; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031012 | extracellular matrix | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=87.5; evalue=1.66e-121; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048046 | apoplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.361; coverage=90.931; evalue=4.68e-93; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098552 | side of membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=87.5; evalue=1.66e-121; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004222 | metalloendopeptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=87.5; evalue=1.66e-121; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008237 | metallopeptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.361; coverage=90.931; evalue=4.68e-93; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=87.5; evalue=1.66e-121; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G24140 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.88; coverage=81.373; evalue=7.27e-89 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G59970 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.902; coverage=80.392; evalue=3.45e-80 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G70170 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.361; coverage=90.931; evalue=4.68e-93 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G45040 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.882; coverage=72.794; evalue=2.8e-114 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G16640 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=87.5; evalue=1.66e-121 | UniProtKB/Swiss-Prot DAT 2026 current_release |