Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_005745 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:172601067-172604523 (+) |
| Description | Similar to At1g48100: Polygalacturonase At1g48100 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_005745 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 11 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g48100 |
Polygalacturonase not involved in the final stages of pod shatter. | No verified direct reference in this release |
At1g80170 |
Probable polygalacturonase At1g80170. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0005975 | carbohydrate metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.029; coverage=80.934; evalue=7.19e-116; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009830 | cell wall modification involved in abscission | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.909; coverage=72.763; evalue=5.25e-89; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009831 | plant-type cell wall modification involved in multidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.029; coverage=80.934; evalue=7.19e-116; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009835 | fruit ripening | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.909; coverage=72.763; evalue=5.25e-89; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009901 | anther dehiscence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.909; coverage=72.763; evalue=5.25e-89; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010047 | fruit dehiscence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.909; coverage=72.763; evalue=5.25e-89; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071555 | cell wall organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.277; coverage=80.739; evalue=6.99e-92; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.029; coverage=80.934; evalue=7.19e-116; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009501 | amyloplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.318; coverage=73.346; evalue=6.33e-88; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.029; coverage=80.934; evalue=7.19e-116; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004650 | polygalacturonase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.029; coverage=80.934; evalue=7.19e-116; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G48100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.029; coverage=80.934; evalue=7.19e-116 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G80170 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.277; coverage=80.739; evalue=6.99e-92 | UniProtKB/Swiss-Prot DAT 2026 current_release |