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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_005574
Query referenceOH1004
LocationChr01:168604140-168606283 (+)
DescriptionSimilar to SAMC1: S-adenosylmethionine carrier 1%2C chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_005574 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 17 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g39460 Transporter involved in exchange reactions through membranes.
Molecular identification of an Arabidopsis S-adenosylmethionine transporter. Analysis of organ distribution, bacterial expression, reconstitution into liposomes, and functional characterization.2006 · DOI: 10.1104/pp.106.086975
Arabidopsis SAMT1 defines a plastid transporter regulating plastid biogenesis and plant development.2006 · DOI: 10.1105/tpc.105.040741
At1g34065 Probable S-adenosylmethionine (SAM) transporter able to catalyze both uniport and exchange reactions through membranes. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009658chloroplast organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.799; coverage=51.412; evalue=4.5e-41; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015805S-adenosyl-L-methionine transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.799; coverage=51.412; evalue=4.5e-41; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048250iron import into the mitochondrionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.256; coverage=54.426; evalue=5.38e-35; UniProt GO evidence=ISS:dictyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051503adenine nucleotide transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.359; coverage=54.049; evalue=5.5e-33; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.799; coverage=51.412; evalue=4.5e-41; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005743mitochondrial inner membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.799; coverage=51.412; evalue=4.5e-41; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.799; coverage=51.412; evalue=4.5e-41; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.799; coverage=51.412; evalue=4.5e-41; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.799; coverage=51.412; evalue=4.5e-41; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009941chloroplast envelopeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.799; coverage=51.412; evalue=4.5e-41; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031966mitochondrial membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.256; coverage=54.426; evalue=5.38e-35; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031969chloroplast membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.799; coverage=51.412; evalue=4.5e-41; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000095S-adenosyl-L-methionine transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.799; coverage=51.412; evalue=4.5e-41; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005381iron ion transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.256; coverage=54.426; evalue=5.38e-35; UniProt GO evidence=ISS:dictyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005509calcium ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.359; coverage=54.049; evalue=5.5e-33; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015093ferrous iron transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.256; coverage=54.426; evalue=5.38e-35; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015215nucleotide transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.359; coverage=54.049; evalue=5.5e-33; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G34065KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.091; coverage=51.789; evalue=3.04e-39UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G39460KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.799; coverage=51.412; evalue=4.5e-41UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGddi:DDB_G0269470KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.256; coverage=54.426; evalue=5.38e-35UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGddi:DDB_G0285599KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.359; coverage=54.049; evalue=5.5e-33UniProtKB/Swiss-Prot DAT 2026 current_release