Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_005416 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:163134407-163141202 (+) |
| Description | Similar to RCH2: Receptor-like protein kinase 2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_005416 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 23 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g24240 |
Together with RGI2, RGI3, RGI4 and RGI5, acts as a receptor of RGF peptides (e.g. RGF1, GLV5/CLEL1/RGF2, GLV7/CLEL3/RGF3, GLV3/RGF4, GLV10/CLEL7/RGF5 and RGF10/CLELN), peptide hormones which maintain the postembryonic root stem cell niche by regulating the expression levels and patterns of the transcription factor PLETHORA (PLT, e.g. PLT1 and PLT2). | |
At5g48940 |
Together with RGI1, RGI3, RGI4 and RGI5, acts as a receptor of RGF peptides (e.g. RGF1, GLV5/CLEL1/RGF2, GLV7/CLEL3/RGF3, GLV3/RGF4, GLV10/CLEL7/RGF5 and RGF10/CLELN), peptide hormones which maintain the postembryonic root stem cell niche by regulating the expression levels and patterns of the transcription factor PLETHORA (PLT, e.g. PLT1 and PLT2). | |
At4g26900 |
IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. | No verified direct reference in this release |
At1g34110 |
Together with RGI1, RGI2, RGI3 and RGI4, acts as a receptor of RGF1, a peptide hormone that maintains the postembryonic root stem cell niche by regulating the expression levels and patterns of the transcription factor PLETHORA (PLT). | |
At5g56040 |
Receptor with a serine/threonine-protein kinase activity (By similarity). |
A novel pollen-pistil interaction conferring high-temperature tolerance during reproduction via CLE45 signaling.2013 · DOI: 10.1016/j.cub.2013.06.060
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000105 | L-histidine biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.912; coverage=14.559; evalue=3.32e-36; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009266 | response to temperature stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=15.07; evalue=6.56e-26; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009755 | hormone-mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.0; coverage=15.964; evalue=1.18e-28; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010074 | maintenance of meristem identity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.248; coverage=14.943; evalue=7.87e-40; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010078 | maintenance of root meristem identity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.248; coverage=14.943; evalue=7.87e-40; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010082 | regulation of root meristem growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.248; coverage=14.943; evalue=7.87e-40; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010449 | root meristem growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.248; coverage=14.943; evalue=7.87e-40; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080092 | regulation of pollen tube growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=15.07; evalue=6.56e-26; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000280 | regulation of root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.248; coverage=14.943; evalue=7.87e-40; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.248; coverage=14.943; evalue=7.87e-40; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.912; coverage=14.559; evalue=3.32e-36; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.912; coverage=14.559; evalue=3.32e-36; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.912; coverage=14.559; evalue=3.32e-36; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000107 | imidazoleglycerol-phosphate synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.912; coverage=14.559; evalue=3.32e-36; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001653 | peptide receptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.248; coverage=14.943; evalue=7.87e-40; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004359 | glutaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.912; coverage=14.559; evalue=3.32e-36; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004674 | protein serine/threonine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.248; coverage=14.943; evalue=7.87e-40; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.248; coverage=14.943; evalue=7.87e-40; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016829 | lyase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.912; coverage=14.559; evalue=3.32e-36; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0038023 | signaling receptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.0; coverage=15.964; evalue=1.18e-28; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042277 | peptide binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.248; coverage=14.943; evalue=7.87e-40; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=15.07; evalue=6.56e-26; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106310 | protein serine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.248; coverage=14.943; evalue=7.87e-40; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G34110 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.0; coverage=15.964; evalue=1.18e-28 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G24240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.248; coverage=14.943; evalue=7.87e-40 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G26900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.912; coverage=14.559; evalue=3.32e-36 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G48940 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.849; coverage=18.646; evalue=4.77e-39 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G56040 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=15.07; evalue=6.56e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release |