Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_005070 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:154181129-154183808 (-) |
| Description | Similar to TD1: Threonine dehydratase 1 biosynthetic%2C chloroplastic (Solanum lycopersicum OX%3D4081) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_005070 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 15 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g10050 |
Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0002213 | defense response to insect | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.291; coverage=78.527; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006565 | L-serine catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.574; coverage=95.768; evalue=0.0; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006566 | L-threonine metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=52.559; coverage=79.624; evalue=1.1e-174; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006567 | L-threonine catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.947; coverage=94.984; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.574; coverage=95.768; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009097 | isoleucine biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.947; coverage=94.984; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009625 | response to insect | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.291; coverage=78.527; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031349 | positive regulation of defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.291; coverage=78.527; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051289 | protein homotetramerization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.291; coverage=78.527; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080027 | response to herbivore | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.291; coverage=78.527; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.947; coverage=94.984; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003941 | L-serine ammonia-lyase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.574; coverage=95.768; evalue=0.0; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004794 | threonine deaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.947; coverage=94.984; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030170 | pyridoxal phosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.947; coverage=94.984; evalue=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.291; coverage=78.527; evalue=0.0; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G10050 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.92; coverage=88.558; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bmj:BMULJ_02699 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=52.559; coverage=79.624; evalue=1.1e-174 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bmu:Bmul_0562 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=52.559; coverage=79.624; evalue=1.1e-174 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | nau:109229701 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.574; coverage=95.768; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sly:100037737 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.947; coverage=94.984; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sly:543983 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.291; coverage=78.527; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |