Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_004847 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:148659737-148660564 (-) |
| Description | Similar to NIFU1: NifU-like protein 1%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_004847 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 13 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g01940 |
Molecular scaffold for [Fe-S] cluster assembly of chloroplastic iron-sulfur proteins. | No verified direct reference in this release |
At5g49940 |
Molecular scaffold for [Fe-S] cluster assembly of chloroplastic iron-sulfur proteins. | No verified direct reference in this release |
At4g25910 |
Molecular scaffold for [Fe-S] cluster assembly of chloroplastic iron-sulfur proteins. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os12g0176200 |
Molecular scaffold for [Fe-S] cluster assembly of chloroplastic iron-sulfur proteins. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009658 | chloroplast organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.596; coverage=77.376; evalue=4.23e-29; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016226 | iron-sulfur cluster assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.623; coverage=95.928; evalue=1.87e-87; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048564 | photosystem I assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.174; coverage=104.072; evalue=2.08e-26; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051604 | protein maturation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.623; coverage=95.928; evalue=1.87e-87; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.623; coverage=95.928; evalue=1.87e-87; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.623; coverage=95.928; evalue=1.87e-87; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.623; coverage=95.928; evalue=1.87e-87; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005198 | structural molecule activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.623; coverage=95.928; evalue=1.87e-87; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005506 | iron ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.623; coverage=95.928; evalue=1.87e-87; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051536 | iron-sulfur cluster binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=57.895; coverage=25.792; evalue=5.59e-17; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051537 | 2 iron, 2 sulfur cluster binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.596; coverage=77.376; evalue=4.23e-29; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051539 | 4 iron, 4 sulfur cluster binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.623; coverage=95.928; evalue=1.87e-87; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060090 | molecular adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.174; coverage=104.072; evalue=2.08e-26; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G01940 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.623; coverage=95.928; evalue=1.87e-87 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G25910 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.174; coverage=104.072; evalue=2.08e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G49940 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.596; coverage=77.376; evalue=4.23e-29 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bsu:BSU32220 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=57.895; coverage=25.792; evalue=5.59e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os12g0176200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.909; coverage=79.638; evalue=4.19e-30 | UniProtKB/Swiss-Prot DAT 2026 current_release |