Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_004620`
Query reference	OH1004
Location	Chr01:141672263-141687882 (-)
Description	Similar to GAT1: GABA transporter 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_004620 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g08230`	High affinity gamma-aminobutyric acid (GABA) transporter probably involved in GABA uptake into cells.	AtGAT1, a high affinity transporter for gamma-aminobutyric acid in Arabidopsis thaliana.2006 · DOI: 10.1074/jbc.m510766200
`At5g41800`	May be involved in the transport of GABA.	No verified direct reference in this release
`At5g40780`	Amino acid-proton symporter.	Arabidopsis LHT1 is a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.2006 · DOI: 10.1105/tpc.106.041012 Comprehensive screening of Arabidopsis mutants suggests the lysine histidine transporter 1 to be involved in plant uptake of amino acids.2007 · DOI: 10.1104/pp.106.092205 Root uptake of cationic amino acids by Arabidopsis depends on functional expression of amino acid permease 5.2008 · DOI: 10.1111/j.1469-8137.2008.02589.x LHT1, a lysine- and histidine-specific amino acid transporter in arabidopsis.1997 · DOI: 10.1104/pp.115.3.1127
`At2g39890`	Proline transporter that mediates proline and glycine betaine transport.	The AtProT family. Compatible solute transporters with similar substrate specificity but differential expression patterns.2005 · DOI: 10.1104/pp.104.055079 Salt stress-induced proline transporters and salt stress-repressed broad specificity amino acid permeases identified by suppression of a yeast amino acid permease-targeting mutant.1996 · DOI: 10.1105/tpc.8.8.1437

Rice

Reference gene ID	Possible function	Papers / DOI
`UniProt: Q69LA1`	Proline transporter that mediates proline transport across the plasma membrane.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0003333	amino acid transmembrane transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.741; coverage=96.344; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006952	defense response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.139; coverage=99.355; evalue=9.21e-53; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015812	gamma-aminobutyric acid transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.741; coverage=96.344; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015824	proline transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.963; coverage=94.194; evalue=3.06e-51; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043090	amino acid import	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.139; coverage=99.355; evalue=9.21e-53; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.139; coverage=99.355; evalue=9.21e-53; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.741; coverage=96.344; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009536	plastid	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.139; coverage=99.355; evalue=9.21e-53; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016020	membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.812; coverage=92.688; evalue=4.06e-157; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015171	amino acid transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.812; coverage=92.688; evalue=4.06e-157; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015172	acidic amino acid transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.139; coverage=99.355; evalue=9.21e-53; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015185	gamma-aminobutyric acid transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.741; coverage=96.344; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015193	L-proline transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.963; coverage=94.194; evalue=3.06e-51; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015293	symporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.139; coverage=99.355; evalue=9.21e-53; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G08230	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.741; coverage=96.344; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G39890	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.963; coverage=94.194; evalue=3.06e-51	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G40780	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.139; coverage=99.355; evalue=9.21e-53	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G41800	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.812; coverage=92.688; evalue=4.06e-157	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os07g0100800	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.702; coverage=92.258; evalue=6.42e-52	UniProtKB/Swiss-Prot DAT 2026 current_release