Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_004596 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:141234432-141235338 (-) |
| Description | Similar to At1g08170: Histone H2B.2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_004596 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 17 GO annotations and 20 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g08170 |
Core component of nucleosome. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006325 | chromatin organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.351; coverage=55.849; evalue=4.97e-41; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019731 | antibacterial humoral response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031507 | heterochromatin formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050829 | defense response to Gram-negative bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.938; coverage=48.679; evalue=2.08e-37; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050830 | defense response to Gram-positive bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.938; coverage=48.679; evalue=2.08e-37; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061644 | protein localization to CENP-A containing chromatin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.163; coverage=48.679; evalue=4.38e-37; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061844 | antimicrobial humoral immune response mediated by antimicrobial peptide | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000786 | nucleosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.351; coverage=55.849; evalue=4.97e-41; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.938; coverage=48.679; evalue=2.08e-37; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005615 | extracellular space | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.351; coverage=55.849; evalue=4.97e-41; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=51.163; coverage=48.679; evalue=2.97e-37; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=51.163; coverage=48.679; evalue=2.97e-37; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.351; coverage=55.849; evalue=4.97e-41; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030527 | structural constituent of chromatin | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.351; coverage=55.849; evalue=4.97e-41; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.938; coverage=48.679; evalue=2.08e-37; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046982 | protein heterodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.351; coverage=55.849; evalue=4.97e-41; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G08170 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.351; coverage=55.849; evalue=4.97e-41 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:319178 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=51.163; coverage=48.679; evalue=2.97e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:319180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.163; coverage=48.679; evalue=4.38e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:319183 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.163; coverage=48.679; evalue=4.38e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:319185 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.163; coverage=48.679; evalue=4.38e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:319187 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.163; coverage=48.679; evalue=4.38e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:665596 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.163; coverage=48.679; evalue=4.38e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:665622 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.163; coverage=48.679; evalue=4.38e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:121402223 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:121402228 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:121402236 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:121402237 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:121402247 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:121402248 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:121402259 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:121402260 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:121402261 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:121402274 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:121402275 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:446588 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.938; coverage=48.679; evalue=2.4e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release |