Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_004482 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:137622405-137624424 (+) |
| Description | Similar to GRIK2: Serine/threonine-protein kinase GRIK2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_004482 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 29 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g60550 |
Activates SnRK1.1/KIN10 and SnRK1.2/KIN11 by phosphorylation of their activation-loop 'Thr-198' and 'Thr-176', respectively. |
Geminivirus infection up-regulates the expression of two Arabidopsis protein kinases related to yeast SNF1- and mammalian AMPK-activating kinases.2006 · DOI: 10.1104/pp.106.088476 DNA sequences from Arabidopsis, which encode protein kinases and function as upstream regulators of Snf1 in yeast.2007 · DOI: 10.1074/jbc.m611244200
|
At3g45240 |
Activates SnRK1.1/KIN10 and SnRK1.2/KIN11 by phosphorylation of their activation-loop 'Thr-198' and 'Thr-176', respectively. |
Geminivirus infection up-regulates the expression of two Arabidopsis protein kinases related to yeast SNF1- and mammalian AMPK-activating kinases.2006 · DOI: 10.1104/pp.106.088476 DNA sequences from Arabidopsis, which encode protein kinases and function as upstream regulators of Snf1 in yeast.2007 · DOI: 10.1074/jbc.m611244200
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006468 | protein phosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.717; coverage=101.891; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009615 | response to virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.717; coverage=101.891; evalue=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010514 | induction of conjugation with cellular fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=EXP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010971 | positive regulation of G2/M transition of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019722 | calcium-mediated signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.017; coverage=69.74; evalue=1.38e-55; UniProt GO evidence=TAS:WormBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032956 | regulation of actin cytoskeleton organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035556 | intracellular signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.717; coverage=101.891; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042149 | cellular response to glucose starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046777 | protein autophosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.466; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051523 | cell growth mode switching, monopolar to bipolar | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051726 | regulation of cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061762 | CAMKK-AMPK signaling cascade | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140648 | positive regulation of cell cycle switching, mitotic to meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=EXP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904262 | negative regulation of TORC1 signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.717; coverage=101.891; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.717; coverage=101.891; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=HDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.466; coverage=100.0; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032153 | cell division site | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051285 | cell cortex of cell tip | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902716 | cell cortex of growing cell tip | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004672 | protein kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.717; coverage=101.891; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004674 | protein serine/threonine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.717; coverage=101.891; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004683 | calcium/calmodulin-dependent protein kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=ISS:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005516 | calmodulin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57; UniProt GO evidence=ISS:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.717; coverage=101.891; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016301 | kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.717; coverage=101.891; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.017; coverage=69.74; evalue=1.38e-55; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106310 | protein serine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.717; coverage=101.891; evalue=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G45240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.466; coverage=100.0; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G60550 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.717; coverage=101.891; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cel:CELE_C05H8.1 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.017; coverage=69.74; evalue=1.38e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0279405 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.361; coverage=68.085; evalue=1.77e-64 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2538951 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.199; coverage=71.158; evalue=6.12e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release |