Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_004425 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:135508611-135511628 (+) |
| Description | Similar to WIP2: Zinc finger protein WIP2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_004425 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 17 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g57670 |
Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. | No verified direct reference in this release |
At1g51220 |
Probable transcriptional regulator. | No verified direct reference in this release |
At3g20880 |
Probable transcriptional regulator. | No verified direct reference in this release |
At1g13290 |
Probable transcriptional regulator (Probable). | No verified direct reference in this release |
At1g34790 |
May act as a transcriptional regulator involved in the differentiation of young endothelium. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0001709 | cell fate determination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.83; coverage=92.151; evalue=7.51e-127; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.83; coverage=92.151; evalue=7.51e-127; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.83; coverage=92.151; evalue=7.51e-127; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009813 | flavonoid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=63.679; coverage=61.628; evalue=1.95e-92; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009860 | pollen tube growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.83; coverage=92.151; evalue=7.51e-127; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010087 | phloem or xylem histogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.246; coverage=70.93; evalue=1.19e-97; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010305 | leaf vascular tissue pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.246; coverage=70.93; evalue=1.19e-97; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.83; coverage=92.151; evalue=7.51e-127; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010500 | transmitting tissue development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.83; coverage=92.151; evalue=7.51e-127; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010588 | cotyledon vascular tissue pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.246; coverage=70.93; evalue=1.19e-97; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.246; coverage=70.93; evalue=1.19e-97; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048367 | shoot system development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.246; coverage=70.93; evalue=1.19e-97; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080022 | primary root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.83; coverage=92.151; evalue=7.51e-127; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990058 | fruit replum development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.83; coverage=92.151; evalue=7.51e-127; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.83; coverage=92.151; evalue=7.51e-127; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.83; coverage=92.151; evalue=7.51e-127; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.83; coverage=92.151; evalue=7.51e-127; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G13290 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.246; coverage=70.93; evalue=1.19e-97 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G34790 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=63.679; coverage=61.628; evalue=1.95e-92 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G51220 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.413; coverage=81.686; evalue=3.06e-126 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G20880 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.013; coverage=89.535; evalue=2.82e-124 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G57670 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.83; coverage=92.151; evalue=7.51e-127 | UniProtKB/Swiss-Prot DAT 2026 current_release |