Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_004359 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:133384173-133386319 (-) |
| Description | Similar to MTP4: Metal tolerance protein 4 (Oryza sativa subsp. japonica OX%3D39947) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_004359 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g58060 |
Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis. | No verified direct reference in this release |
At1g79520 |
Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os03g0226400 |
Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis. | No verified direct reference in this release |
Os02g0775100 |
Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis. | No verified direct reference in this release |
Os01g0837800 |
Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006826 | iron ion transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.833; coverage=95.05; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009845 | seed germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.833; coverage=95.05; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048316 | seed development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.833; coverage=95.05; evalue=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071421 | manganese ion transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.833; coverage=95.05; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.833; coverage=95.05; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005774 | vacuolar membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.869; coverage=94.554; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009705 | plant-type vacuole membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.833; coverage=95.05; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.869; coverage=94.554; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035618 | root hair | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.833; coverage=95.05; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005384 | manganese ion transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.869; coverage=94.554; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008324 | monoatomic cation transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.402; coverage=81.188; evalue=6.8e-120; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010486 | manganese:proton antiporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=53.501; coverage=88.366; evalue=8.09e-120; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G79520 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.402; coverage=81.188; evalue=6.8e-120 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G58060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.833; coverage=95.05; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0837800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=53.501; coverage=88.366; evalue=8.09e-120 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os02g0775100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=69.674; coverage=98.762; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0226400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.869; coverage=94.554; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |