Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_004226 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:130170187-130172022 (+) |
| Description | Similar to MET1: Protein MET1%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_004226 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 24 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g55480 |
Involved in photosystem II supercomplex formation and repair, probably acting as a psbB/psbC chaperone on the stromal side of the membrane. | No verified direct reference in this release |
At1g02910 |
Chaperone required for efficient photosystem II (PSII) assembly. | |
At3g01510 |
Starch granule-associated phosphoglucan phosphatase involved in the control of starch accumulation. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0005983 | starch catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.952; coverage=25.455; evalue=4.03e-06; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009416 | response to light stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009611 | response to wounding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009644 | response to high light intensity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010206 | photosystem II repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010207 | photosystem II assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010270 | photosystem II oxygen evolving complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.884; coverage=26.061; evalue=3.17e-07; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015979 | photosynthesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.884; coverage=26.061; evalue=3.17e-07; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009523 | photosystem II | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009534 | chloroplast thylakoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009535 | chloroplast thylakoid membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009569 | chloroplast starch grain | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.952; coverage=25.455; evalue=4.03e-06; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009575 | chromoplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009579 | thylakoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031969 | chloroplast membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043036 | starch grain | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.952; coverage=25.455; evalue=4.03e-06; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098572 | stromal side of plastid thylakoid membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004721 | phosphoprotein phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.952; coverage=25.455; evalue=4.03e-06; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019203 | carbohydrate phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.952; coverage=25.455; evalue=4.03e-06; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G02910 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.884; coverage=26.061; evalue=3.17e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G55480 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.273; coverage=73.333; evalue=2.51e-140 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G01510 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.952; coverage=25.455; evalue=4.03e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release |