Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_004171 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:127302658-127304505 (+) |
| Description | Similar to FTA: Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha (Solanum lycopersicum OX%3D4081) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_004171 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 32 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g59380 |
Essential subunit of both the farnesyltransferase and the geranylgeranyltransferase complex. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0007323 | peptide pheromone maturation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.908; coverage=99.704; evalue=3.01e-161; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008360 | regulation of cell shape | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=61.162; coverage=96.746; evalue=7.14e-141; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=61.162; coverage=96.746; evalue=7.14e-141; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009788 | negative regulation of abscisic acid-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=61.162; coverage=96.746; evalue=7.14e-141; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0018342 | protein prenylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=61.162; coverage=96.746; evalue=7.14e-141; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0018343 | protein farnesylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.908; coverage=99.704; evalue=3.01e-161; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0018344 | protein geranylgeranylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.908; coverage=99.704; evalue=3.01e-161; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035022 | positive regulation of Rac protein signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048509 | regulation of meristem development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=61.162; coverage=96.746; evalue=7.14e-141; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060632 | regulation of microtubule-based movement | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071340 | skeletal muscle acetylcholine-gated channel clustering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080120 | CAAX-box protein maturation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=61.162; coverage=96.746; evalue=7.14e-141; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.908; coverage=99.704; evalue=3.01e-161; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005875 | microtubule associated complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79; UniProt GO evidence=IEA:GOC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005953 | CAAX-protein geranylgeranyltransferase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.908; coverage=99.704; evalue=3.01e-161; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005965 | protein farnesyltransferase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.908; coverage=99.704; evalue=3.01e-161; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004311 | geranylgeranyl diphosphate synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=61.162; coverage=96.746; evalue=7.14e-141; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004660 | protein farnesyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.908; coverage=99.704; evalue=3.01e-161; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004661 | protein geranylgeranyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.908; coverage=99.704; evalue=3.01e-161; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004662 | CAAX-protein geranylgeranyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.908; coverage=99.704; evalue=3.01e-161; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004663 | Rab geranylgeranyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008017 | microtubule binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008318 | protein prenyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=61.162; coverage=96.746; evalue=7.14e-141; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010698 | acetyltransferase activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019899 | enzyme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79; UniProt GO evidence=IPI:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030971 | receptor tyrosine kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043014 | alpha-tubulin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046982 | protein heterodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=61.162; coverage=96.746; evalue=7.14e-141; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060090 | molecular adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79; UniProt GO evidence=EXP:DisProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G59380 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=61.162; coverage=96.746; evalue=7.14e-141 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:281169 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.849; coverage=93.787; evalue=7.53e-82 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:2339 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.073; coverage=97.041; evalue=1.1e-79 | UniProtKB/Swiss-Prot DAT 2026 current_release |