Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_003555 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:85466975-85473704 (-) |
| Description | Similar to ROPGAP7: Rho GTPase-activating protein 7 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_003555 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 33 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g19390 |
Acts as a GTPase activator for the Rac-type GTPase by converting it to an inactive GDP-bound state. | No verified direct reference in this release |
At5g12150 |
Acts as a GTPase activator for the Rac-type GTPase by converting it to an inactive GDP-bound state. | No verified direct reference in this release |
At4g24580 |
Acts as a GTPase activator for the Rac-type GTPase by converting it to an inactive GDP-bound state. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0007165 | signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.517; coverage=102.408; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007266 | Rho protein signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.586; coverage=19.381; evalue=1.6e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008361 | regulation of cell size | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.586; coverage=19.381; evalue=1.6e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009846 | pollen germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.296; coverage=97.706; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009860 | pollen tube growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.296; coverage=97.706; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009865 | pollen tube adhesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.296; coverage=97.706; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009920 | cell plate formation involved in plant-type cell wall biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.517; coverage=102.408; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030154 | cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.909; coverage=50.459; evalue=1.89e-14; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035021 | negative regulation of Rac protein signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.909; coverage=50.459; evalue=1.89e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035024 | negative regulation of Rho protein signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.296; coverage=97.706; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043547 | positive regulation of GTPase activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.296; coverage=97.706; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048868 | pollen tube development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.296; coverage=97.706; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900028 | negative regulation of ruffle assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.909; coverage=50.459; evalue=1.89e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.296; coverage=97.706; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.517; coverage=102.408; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.586; coverage=19.381; evalue=1.6e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005856 | cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.909; coverage=50.459; evalue=1.89e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.517; coverage=102.408; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005912 | adherens junction | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.909; coverage=50.459; evalue=1.89e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005925 | focal adhesion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.909; coverage=50.459; evalue=1.89e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005938 | cell cortex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.296; coverage=97.706; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.517; coverage=102.408; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009535 | chloroplast thylakoid membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.517; coverage=102.408; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016324 | apical plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.296; coverage=97.706; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042995 | cell projection | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.909; coverage=50.459; evalue=1.89e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045177 | apical part of cell | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.296; coverage=97.706; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070382 | exocytic vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.296; coverage=97.706; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090406 | pollen tube | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.296; coverage=97.706; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003924 | GTPase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.586; coverage=19.381; evalue=1.6e-13; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005096 | GTPase activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.517; coverage=102.408; evalue=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005525 | GTP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.586; coverage=19.381; evalue=1.6e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008289 | lipid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.586; coverage=19.381; evalue=1.6e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031267 | small GTPase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.296; coverage=97.706; evalue=0.0; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G24580 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.296; coverage=97.706; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G12150 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=62.877; coverage=98.853; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G19390 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.517; coverage=102.408; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:83478 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=20.909; coverage=50.459; evalue=1.89e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:414634 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.586; coverage=19.381; evalue=1.6e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release |