Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_003243 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:71746725-71751319 (+) |
| Description | Similar to Tubgcp6: Gamma-tubulin complex component 6 (Mus musculus OX%3D10090) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_003243 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 20 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g53760 |
Gamma-tubulin complex is necessary for microtubule nucleation at the microtubule organizing centers (MTOCs). | No verified direct reference in this release |
At5g06680 |
Gamma-tubulin complex is necessary for microtubule nucleation at the microtubule organizing centers (MTOCs). | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000278 | mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.181; coverage=27.747; evalue=2.23e-22; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007020 | microtubule nucleation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.181; coverage=27.747; evalue=2.23e-22; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009624 | response to nematode | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.699; coverage=30.912; evalue=8.8e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031122 | cytoplasmic microtubule organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.181; coverage=27.747; evalue=2.23e-22; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043622 | cortical microtubule organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.699; coverage=30.912; evalue=8.8e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051225 | spindle assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.181; coverage=27.747; evalue=2.23e-22; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051321 | meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.181; coverage=27.747; evalue=2.23e-22; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000922 | spindle pole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.181; coverage=27.747; evalue=2.23e-22; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000930 | gamma-tubulin complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.181; coverage=27.747; evalue=2.23e-22; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000931 | gamma-tubulin ring complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.181; coverage=27.747; evalue=2.23e-22; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.699; coverage=30.912; evalue=8.8e-15; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005813 | centrosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.181; coverage=27.747; evalue=2.23e-22; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005819 | spindle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.699; coverage=30.912; evalue=8.8e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.832; coverage=27.747; evalue=1.48e-20; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005874 | microtubule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.181; coverage=27.747; evalue=2.23e-22; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.699; coverage=30.912; evalue=8.8e-15; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.832; coverage=27.747; evalue=1.48e-20; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045298 | tubulin complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.699; coverage=30.912; evalue=8.8e-15; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008017 | microtubule binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.181; coverage=27.747; evalue=2.23e-22; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043015 | gamma-tubulin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.181; coverage=27.747; evalue=2.23e-22; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G53760 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.699; coverage=30.912; evalue=8.8e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:85378 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.832; coverage=27.747; evalue=1.48e-20 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:328580 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.181; coverage=27.747; evalue=2.23e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release |