Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_002216 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:43860040-43871735 (-) |
| Description | Similar to SEC22: 25.3 kDa vesicle transport protein (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_002216 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 31 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g11890 |
V-SNARE involved in vesicle trafficking from the ER to the Golgi complex and required for early secretion. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006906 | vesicle fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.818; coverage=15.12; evalue=1.07e-55; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007029 | endoplasmic reticulum organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007030 | Golgi organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009267 | cellular response to starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.818; coverage=15.12; evalue=1.07e-55; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009553 | embryo sac development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009555 | pollen development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016192 | vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.818; coverage=15.12; evalue=1.07e-55; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016236 | macroautophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.818; coverage=15.12; evalue=1.07e-55; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045732 | positive regulation of protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.818; coverage=15.12; evalue=1.07e-55; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048229 | gametophyte development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048280 | vesicle fusion with Golgi apparatus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902902 | negative regulation of autophagosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.818; coverage=15.12; evalue=1.07e-55; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000421 | autophagosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.818; coverage=15.12; evalue=1.07e-55; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005765 | lysosomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.818; coverage=15.12; evalue=1.07e-55; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005793 | endoplasmic reticulum-Golgi intermediate compartment | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.818; coverage=15.12; evalue=1.07e-55; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012507 | ER to Golgi transport vesicle membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030133 | transport vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.818; coverage=15.12; evalue=1.07e-55; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030137 | COPI-coated vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.818; coverage=15.12; evalue=1.07e-55; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030670 | phagocytic vesicle membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.818; coverage=15.12; evalue=1.07e-55; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031201 | SNARE complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033116 | endoplasmic reticulum-Golgi intermediate compartment membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.818; coverage=15.12; evalue=1.07e-55; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005484 | SNAP receptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G11890 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.697; coverage=14.983; evalue=1.35e-132 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:9554 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.818; coverage=15.12; evalue=1.07e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:20333 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.818; coverage=15.12; evalue=1.07e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pon:100172644 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.818; coverage=15.12; evalue=1.07e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:310710 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.818; coverage=15.12; evalue=1.07e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release |